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Analyzed 3 days ago. based on code collected 3 months ago.

Project Summary

Chaste - Cancer Heart And Soft Tissue Environment

Chaste is a computational biology simulation package. It provides a cardiac simulation package which provides a way to use CellML electrophysiology models in tissue simulations. The cardiac code is suitable for high performance computing on large supercomputers.

The cell-based side of the code provides a variety of agent-based models (cellular automata, cell-centre-based (on and off mesh), cell vertex, cellular Potts models) for use in biological settings where cells divide and die according to other models.

For details please see the recent overview paper in PLoS Computational Biology www.ploscompbiol.org/article/info%3Adoi%2F10.1371%2Fjournal.pcbi.1002970

Tags

biology cancer cardiac electrophysiology mathematical_model simulation soft-tissue vertex

In a Nutshell, Chaste...

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Languages

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C++
64%
XML
22%
XML Schema
5%
13 Other
9%

30 Day Summary

Feb 8 2017 — Mar 10 2017

12 Month Summary

Mar 10 2016 — Mar 10 2017
  • 1304 Commits
    Down -407 (23%) from previous 12 months
  • 15 Contributors
    Up + 1 (7%) from previous 12 months