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Analyzed 2 months ago. based on code collected 2 months ago.

Commit Message	Contributor	Files Modified	Lines Added	Lines Removed	Code Location	Date
Mar 01, 2023 — Mar 01, 2024 Showing page 2 of 4 Search / Filter on:
Added the test case for random_pattern_remover. Changed the iterations of random_pattern_remover to 10, made sure that both GeneDesigns were identical	Steffi Liu	More...				almost 14 years ago
Added new random_pattern_remover sub to the end of GeneDesign. Finished the help text and debugging/cleaning of Restriction_Site_Subtraction.pl. sites.txt is included for testing purposes	Steffi Liu	More...				almost 14 years ago
Wrote more of the help, still debugging - problem with the count subroutine	Steffi Liu	More...				almost 14 years ago
Roughly finished the subroutine for generating random codons, started help menu	Steffi Liu	More...				almost 14 years ago
Fixed the enzyme detection reporting on the command line	Steffi Liu	More...				almost 14 years ago
Added RSCU table file option, but minor bug in checking which enzymes removed/notremoved/not existent	Steffi Liu	More...				almost 14 years ago
Started on option for RSCU table input and on the response if an enzyme is not present. Not finished with either	Steffi Liu	More...				almost 14 years ago
notes for changes	notadoctor	More...				almost 14 years ago
This is the command line version of gdSSREM	Steffi Liu	More...				almost 14 years ago
Spelling mistakes	Steffi Liu	More...				almost 14 years ago
changed docpath to linkpath for manual links	notadoctor	More...				about 14 years ago
Merge branch 'master' of github.com:GeneDesign/GeneDesign	notadoctor	More...				about 14 years ago
changed docpath to linkpath so that manual links work	notadoctor	More...				about 14 years ago
forgot to remove $columns when Text::Wrap went away	Sarah Richardson	More...				about 14 years ago
Fixing sequence passing from codon juggling	notadoctor	More...				over 14 years ago
added FASTA file output to the appropriate modules	notadoctor	More...				over 14 years ago
I don't know if localhost is better have to try it	notadoctor	More...				over 14 years ago
added offer_fasta function to give FASTA output from module conclusions, and the closer function to be compatible with new forms	notadoctor	More...				over 14 years ago
Added IO::Socket to help detect linkpath	notadoctor	More...				over 14 years ago
Added the other two building block design modules to the next step options in every applicable module	notadoctor	More...				over 14 years ago
Missing line of the manual	notadoctor	More...				over 14 years ago
Added RE overlap; finished Design_Building_Blocks	Sarah Richardson	More...				over 14 years ago
Tightened up some redundant code	Sarah Richardson	More...				over 14 years ago
Finished User Design and Overlap Design in Building Block script	Sarah Richardson	More...				over 14 years ago
oops - left a debugging comment in	Sarah Richardson	More...				over 14 years ago
fixed bug in OlapDes where building blocks are not generated to three prime end of input sequence	Sarah Richardson	More...				over 14 years ago
more cleaning	Sarah Richardson	More...				over 14 years ago
Added fasta_writer function	Sarah Richardson	More...				over 14 years ago
Merge branch 'master' of github.com:GeneDesign/GeneDesign	notadoctor	More...				over 14 years ago
help tweaks etc	notadoctor	More...				over 14 years ago

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