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Very Low Activity
Commits
: Listings
Analyzed
about 6 hours
ago. based on code collected
about 10 hours
ago.
May 03, 2023 — May 03, 2024
Showing page 8 of 20
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Contributor
Files Modified
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Code Location
Date
High res figures for the paper
DannyArends
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almost 8 years ago
Using the diveRsity package to calculate some additional statistics
DannyArends
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almost 8 years ago
Minor updates, writing out amova results
DannyArends
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almost 8 years ago
Adding STAMMP amova analysis
DannyArends
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almost 8 years ago
More smoothing of the BxD data
DannyArends
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almost 8 years ago
Removing the duplicated genotype
DannyArends
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almost 8 years ago
Adding the output format for structure analysis tool
DannyArends
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almost 8 years ago
Analysis on GOAT SNP data
DannyArends
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almost 8 years ago
Minor updates spider plot
DannyArends
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almost 8 years ago
Adding the analysis of mRNA from RNA-Seq data. convert reads to RPKM, and do differential expression on it
DannyArends
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almost 8 years ago
Updates from last week
DannyArends
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almost 8 years ago
Blast all the probes against all the genomes !
DannyArends
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about 8 years ago
Changing the names of the phenotypes on the spiderplot
DannyArends
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about 8 years ago
Minor update to the QC code
DannyArends
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about 8 years ago
Remapping probes to CHIR1.0 and CHIR2.0
DannyArends
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about 8 years ago
Initial code to harmonize the 52K SNP chip data for Goats
DannyArends
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about 8 years ago
Fixing obvious genotype errors
DannyArends
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about 8 years ago
Updates to the BxD genotype work
DannyArends
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about 8 years ago
Updating the code for the BxD strains, no smoothing, but we get output to excel and color all recombinations based on their status
DannyArends
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about 8 years ago
Trying the bxd genotypes in R/qtl
DannyArends
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about 8 years ago
Updates to the spider plot
DannyArends
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about 8 years ago
Some initial code to look at the BxD genotype data
DannyArends
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about 8 years ago
another minor update
DannyArends
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about 8 years ago
Adding a more comments
DannyArends
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about 8 years ago
Initial version of the QTL mapping script
DannyArends
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about 8 years ago
Adding header
DannyArends
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about 8 years ago
Updates to the megaMuga analysis code
DannyArends
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about 8 years ago
Updates to the complementation test
DannyArends
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about 8 years ago
Updates to the mouse code, ATB and MegaMuga but also some ASE updates
DannyArends
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about 8 years ago
Updates horse paper
DannyArends
More...
about 8 years ago
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