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Analyzed about 13 hours ago. based on code collected about 18 hours ago.

Commit Message	Contributor	Files Modified	Lines Added	Lines Removed	Code Location	Date
Apr 18, 2023 — Apr 18, 2024 Showing page 1 of 8 Search / Filter on:
universal isa is deprecated and throws compile error	nickmorales	More...				over 5 years ago
fix syntax error	Jeremy D. Edwards	More...				almost 10 years ago
Revert "Depend on Bio::GFF3 instead of Bio::GFF3::LowLevel"	Jonathan "Duke" Leto	More...				over 12 years ago
Depend on Bio::GFF3 instead of Bio::GFF3::LowLevel	Jonathan "Duke" Leto	More...				over 12 years ago
Prettify our Build.PL. No functional changes	Jonathan "Duke" Leto	More...				over 12 years ago
change bin tweaking to take bin size argument, instead of number of bins, and tweak stats binning further	Robert Buels	More...				almost 13 years ago
round bin sizes to integers	Robert Buels	More...				almost 13 years ago
add Mock::Quick dep	Robert Buels	More...				almost 13 years ago
fix intergenic length in case of overlapping gene models	Robert Buels	More...				almost 13 years ago
add trimming to frequency distribution calculations in ITAG release statistics	Robert Buels	More...				almost 13 years ago
set a hard limit of 20kb on intron length. any longer is considered an error	Robert Buels	More...				almost 13 years ago
bugfix to intron length calculation	Robert Buels	More...				almost 13 years ago
shut up extraneous print	Robert Buels	More...				almost 13 years ago
change itag_generate_release over to use CXGN::ITAG::Release::View::README	Robert Buels	More...				almost 13 years ago
fix GO term statistics	Robert Buels	More...				almost 13 years ago
Update to depend on 0.4 which should hit CPAN soon	Jonathan "Duke" Leto	More...				almost 13 years ago
factor out ITAG release README generation into a module	Robert Buels	More...				almost 13 years ago
added missing dep on Bio::GFF3::LowLevel	Robert Buels	More...				almost 13 years ago
test that the evidence was counted correctly also	Robert Buels	More...				almost 13 years ago
update CXGN::ITAG::Statistics to work without genomic_all, add some basic tests for it	Robert Buels	More...				almost 13 years ago
instead of dying, return no data and warn if the metadata file is missing	Robert Buels	More...				about 13 years ago
make CXGN::ITAG::Release require _metadata.ini files in each ITAG release. will retrofit these onto existing releases. Been meaning to do this for a while, decouples the file metadata from the code, since the file metadata basically changes with each release.	Robert Buels	More...				about 13 years ago
align fatcommas in Build.PL	Robert Buels	More...				about 13 years ago
add tests to release.t for a decimal-containing release tag	Robert Buels	More...				about 13 years ago
add explicit mention of pseudomolecules	Robert Buels	More...				about 13 years ago
make ITAG series 2 description of genomic fasta file more general	Robert Buels	More...				about 13 years ago
bugfix to infernal lines generalization	Robert Buels	More...				about 13 years ago
fixed missing transcripts analysis lines	Robert Buels	More...				about 13 years ago
bugfix to infernal-lines generalization in itag release generator	Robert Buels	More...				about 13 years ago
bugfix to ITAG stats gatherer, was depending on the "ITAG_renaming" type, which has now changed	Robert Buels	More...				about 13 years ago

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