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Moderate Activity
Commits
: Listings
Analyzed
1 day
ago. based on code collected
1 day
ago.
Sep 17, 2024 — Sep 17, 2025
Showing page 15 of 540
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Update black etc in pre-commit
Peter Cock
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over 1 year ago
Fix typing on `strictly_equals` (#4653)
bzoracler
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over 1 year ago
Add strict equality method to PDB model classes (#4593)
Will Tyler
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over 1 year ago
Add a writer to Bio.Blast (#4647)
Michiel de Hoon
as mdehoon
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over 1 year ago
Add biomoltrans to pdb header parsing and mmtf writing (#4613)
James Krieger
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over 1 year ago
Static typing for Bio.PDB (#4641)
Thomas Holder
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over 1 year ago
changes requested in https://github.com/biopython/biopython/pull/4638#discussion_r1506095297
Manuel Lera Ramirez
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over 1 year ago
closes #4604
Manuel Lera-Ramirez
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over 1 year ago
remove code duplication
Manuel Lera-Ramirez
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over 1 year ago
address comments
Manuel Lera-Ramirez
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over 1 year ago
news item
Manuel Lera Ramirez
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over 1 year ago
closes #4611
Manuel Lera Ramirez
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over 1 year ago
Downgrade exception to warning in case of entity id duplication. (#4623)
João Rodrigues
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over 1 year ago
Add a PDBML (PDB XML) parser (#4591)
Will Tyler
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over 1 year ago
Make SeqIO's import of MultipleSeqAlignment lazy.
Peter Cock
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over 1 year ago
remove stray imports (#4626)
Michiel de Hoon
as mdehoon
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over 1 year ago
Bio.Blast consistent with Bio.SearchIO (#4617)
Michiel de Hoon
as mdehoon
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over 1 year ago
add current DTD for clinvar esummary (#4619)
Rudolf Koopmann
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over 1 year ago
Dual license Bio/Align/analysis.py
Peter Cock
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over 1 year ago
BSD dual license Bio/codonalign/__init__.py
Peter Cock
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over 1 year ago
BSD dual license Bio/codonalign/codonalignment.py
Peter Cock
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over 1 year ago
BSD dual license Bio/codonalign/codonseq.py
Peter Cock
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over 1 year ago
More BSD dual licensing progress for NEWS
Peter Cock
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over 1 year ago
Dual license Bio/motifs/jaspar/__init__.py
Peter Cock
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over 1 year ago
Dual license Bio/motifs/jaspar/db.py
Peter Cock
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over 1 year ago
added my name to the contributors
Judith Bernett
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over 1 year ago
ran black on test_cellosaurus.py
Judith Bernett
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over 1 year ago
Changed rst table
Judith Bernett
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over 1 year ago
Updated the cellosaurus tests: - text files updated so that the entries look like the entries of the latest cellosaurus version (02-2024) - test__str__ was extended by AG and DT fields
Judith Bernett
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over 1 year ago
Now also parsing the age (AG) and date (DT) fields. Also fixed a "bug" that would never occur since the fields just occur once per entry. In this bug, the reader would try to append to a field defined as string, which is not possible as append can just be called on lists.
Judith Bernett
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over 1 year ago
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