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greg-ensembl

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Analyzed about 4 hours ago. based on code collected about 7 hours ago.

Commit Message	Contributor	Files Modified	Lines Added	Lines Removed	Code Location	Date
Apr 19, 2023 — Apr 19, 2024 Showing page 1 of 17 Search / Filter on:
Update mysql_functions.R	Greg Jordan	More...				over 10 years ago
Some combination of alnscore and corrections stuff.	Gregory Jordan	More...				almost 12 years ago
Alnscore updates.	Gregory Jordan	More...				almost 12 years ago
More hyphy work. Almost automated...	Gregory Jordan	More...				about 12 years ago
Working MPI commands for HYPHY corrections.	Gregory Jordan	More...				about 12 years ago
Update species tree for mammals dnds estimates.	Gregory Jordan	More...				about 12 years ago
Closer to working GA test running.	Gregory Jordan	More...				about 12 years ago
Hyphy stuff for GA models.	Gregory Jordan	More...				about 12 years ago
First wrap-up of bootstrap replciates summary.	Gregory Jordan	More...				about 12 years ago
Start collecting and summarizing bootstrap dN/dS reps.	Gregory Jordan	More...				about 12 years ago
Updates from EBI. Reduce MySQL usage for speies tree gathering.	Gregory Jordan	More...				about 12 years ago
Fix NCBI tree topology, work on estimating branch dnds.	Gregory Jordan	More...				about 12 years ago
Fix loading of species tree from EBI cluster.	Gregory Jordan	More...				about 12 years ago
Add species trees to orthologs directory.	gjuggler	More...				about 12 years ago
Merge branch 'master' of github.com:gjuggler/greg-ensembl	gjuggler	More...				about 12 years ago
Sanger updates, Codeml mostly	gjuggler	More...				about 12 years ago
Updates EBI side. Subclades sim, and various files added from mammals.	Gregory Jordan	More...				about 12 years ago
Add subclades directory.	Greg Jordan	More...				about 12 years ago
Merge branch 'master' of github.com:gjuggler/greg-ensembl	gjuggler	More...				about 12 years ago
Sanger update.	gjuggler	More...				about 12 years ago
Add tree.R	gjuggler	More...				about 12 years ago
Fix merge conflicts.	Greg Jordan	More...				about 12 years ago
Updates EBI.	Greg Jordan	More...				about 12 years ago
Various updates.	gjuggler	More...				about 12 years ago
Add non-gap BL filtering for alignment output	gjuggler	More...				over 12 years ago
Updates from EBI machine.	Greg Jordan	More...				over 12 years ago
Updates from Sanger machine.	gjuggler	More...				over 12 years ago
Merge branch 'master' of github.com:gjuggler/greg-ensembl	Greg Jordan	More...				over 12 years ago
Add files from final version.	Greg Jordan	More...				over 12 years ago
Fix merge conflicts.	gjuggler	More...				over 12 years ago

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