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Analyzed 11 days ago. based on code collected 12 days ago.

Commit Message	Contributor	Files Modified	Lines Added	Lines Removed	Code Location	Date
May 20, 2023 — May 20, 2024 Showing page 15 of 17 Search / Filter on:
Add scripts directory to hold short, small scripts for plotting, output, etc.	Greg Jordan	More...				over 14 years ago
Commit some changes coming from the Sanger farm.	Greg Jordan	More...				over 14 years ago
Merge branch 'master' of [email protected]:gjuggler/greg-ensembl	Greg Jordan	More...				over 14 years ago
Tweaks in preparation for new full Compara site-wise run.	Greg Jordan	More...				over 14 years ago
Update EslrPlots to work with the new GitHub aln-tools.	Greg Jordan	More...				over 14 years ago
Update various scripts to put the Slrsim pipeline in a pretty good state. Able to collect charts with specificity, power, etc. Still working on good ROC plots...	Greg Jordan	More...				over 14 years ago
Fix up the bayes extraction in Codeml.	Greg Jordan	More...				over 14 years ago
Small modifications to ComparaUtils and AlignUtils.	Greg Jordan	More...				over 14 years ago
Create a new Runnable and SQL table for collecting Slrsim site-wise stats.	Greg Jordan	More...				over 14 years ago
Some updates to slrsim.	Greg Jordan	More...				over 14 years ago
Remove unneeded aln_tools stuff.	Greg Jordan	More...				over 14 years ago
Work on dealing with Slr_wobble output.	Greg Jordan	More...				over 14 years ago
Add example file for GO category tests in R.	Greg Jordan	More...				over 14 years ago
This 'n that.	Greg Jordan	More...				over 14 years ago
Add omega types for PhyloSim output	Greg Jordan	More...				over 14 years ago
Fix up some things in SlrSim project. Realize that Indelign requires rooted trees.	Greg Jordan	More...				over 14 years ago
Touch-up the Indelign routines in AlignUtils.	Greg Jordan	More...				over 14 years ago
Merge branch 'master' of [email protected]:gjuggler/greg-ensembl	Greg Jordan	More...				over 14 years ago
Implement codon entropy measures, and work on indelign methods.	Greg Jordan	More...				over 14 years ago
Do some work on slrsim analysis.	Greg Jordan	More...				over 14 years ago
Some structure updates.	Greg Jordan	More...				over 14 years ago
Odds and ends, including finishing the structure pipeline and some table tweaks.	Greg Jordan	More...				over 14 years ago
Add wobble code into Sitewise runnable again.	Greg Jordan	More...				over 14 years ago
Add some more project directories, and update eslr notebook with STRUCTURE results.	Greg Jordan	More...				over 14 years ago
Remove 2 files.	Greg Jordan	More...				over 14 years ago
Fix disulfide bond feature handling.	Greg Jordan	More...				over 14 years ago
Remove classes.	Greg Jordan	More...				over 14 years ago
Remove UniProt JApi dependency.	Greg Jordan	More...				over 14 years ago
In the middle of removing UniProt JApi dependency.	Greg Jordan	More...				over 14 years ago
Remove build dir.	Greg Jordan	More...				over 14 years ago

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