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Analyzed about 11 hours ago. based on code collected about 11 hours ago.

Commit Message	Contributor	Files Modified	Lines Added	Lines Removed	Code Location	Date
Aug 16, 2024 — Aug 16, 2025 Showing page 3 of 114 Search / Filter on:
changes for rlen calculation as per vcf 4.4, 4.5	vasudeva8	More...				5 months ago
update to work with vcf 4.4 prefixed phasing info (#1861)	vasudeva8	More...				5 months ago
Automatically recognize BED vs TSV files and add the option -C, --coords	Petr Danecek	More...				5 months ago
Add error check to bgzf_seek_common()	Andrew Whitwham	More...				5 months ago
update to fail on duplicate LN tags, with different LN values (#1882)	vasudeva8	More...				5 months ago
This fixes broken tests due to msys2 changes. (#1892)	Andrew Whitwham	More...				6 months ago
Clarify bam_set1 parameter documentation.	Chris Wright	More...				6 months ago
Do not return -1 (which signals EOF) in error cases	John Marshall	More...				6 months ago
Ensure kstring overflow checks set errno	John Marshall	More...				6 months ago
Fix bgzf_getc() documentation re returning errors	John Marshall	More...				6 months ago
exits with return value 1 on tabix parse error	vasudeva8	More...				6 months ago
Make HAVE_ATTRIBUTE_TARGET check also check SSSE3 intrinsics work	John Marshall	More...				6 months ago
Reset variant types after updating alleles	Rob Davies	More...				7 months ago
Make it possible to test for VCF_REF as declared in the documentation	pd3	More...				7 months ago
Remove cram seek ability to do range queries via SEEK_CUR.	James Bonfield	More...				7 months ago
Add hts_tpool_worker_id() API	James Bonfield	More...				7 months ago
Allow BYTE_ARRAY_STOP to work on non-zero STOP code with TOK3.	James Bonfield	More...				7 months ago
Typo, change idx to val	Yu Wang	More...				7 months ago
Add bcf_sr_add_hreader() interface	vasudeva8	More...				8 months ago
Fix cram_encode fuzzer issue caused by negative reference lengths.	James Bonfield	More...				8 months ago
Fix a bug in breakend detection	pd3	More...				9 months ago
Make use of posix_memalign for hfile buffer.	James Bonfield	More...				9 months ago
Add an hts_crc32 function to use zlib or libdeflate. (#1850)	James Bonfield	More...				10 months ago
Fix threaded sam_read1 after EOF.	James Bonfield	More...				10 months ago
Convert U to T instead of U to N when sam_parsing.	James Bonfield	More...				10 months ago
BUGFIX header.c sam_hdr_remove_line_pos()	Julian Regalado	More...				10 months ago
Add support for matching VCF lines by ID (PR #1844)	Petr Danecek	More...				10 months ago
Remove `-lhts` from `Libs.private` in the pkg-config file.	Theodore Tsirpanis	More...				10 months ago
Fix issue created in PR#1848	James Bonfield	More...				10 months ago
Add instructions to INSTALL for FreeBSD, NetBSD and OpenBSD. (#1843)	daviesrob	More...				10 months ago

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