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Analyzed 3 months ago. based on code collected 3 months ago.

Commit Message	Contributor	Files Modified	Lines Added	Lines Removed	Code Location	Date
Feb 13, 2023 — Feb 13, 2024 Showing page 25 of 30 Search / Filter on:
JAL-629 longer wait for viewer window for build server	Ben Soares	More...				about 1 year ago
JAL-629 Change --open to --append and --opennew to --open. Make --open(new) part of the same default linkedId scheme. Add and adjust tests.	Ben Soares	More...				about 1 year ago
JAL-629 Test and fix --annotation --ssannotation args. Added a viewerType arg/subval. Fixed multi value getClosest...(). Added a jalview.bin.Launcher eclipse script. Lots of tests for opening structures from CLI.	Ben Soares	More...				about 1 year ago
JAL-629 Now showing temp fac and secondary structure for File opened structures and command line added structure. Added linegraph annotation marks for 'singleton' data points. Added splashscreen property. Adjusted test_fab41.result argfile.	Ben Soares	More...				about 1 year ago
Merge branch 'develop' into releases/Release_2_11_3_Branch	James Procter	More...				about 1 year ago
JAL-629 Adding PAE and TFType at structure loading time. Display PAE automatically	Ben Soares	More...				about 1 year ago
Merge branch 'develop' into features/r2_11_2_alphafold/JAL-629	Ben Soares	More...				about 1 year ago
JAL-629 deleted test output file from repo	Ben Soares	More...				about 1 year ago
JAL-629 mild improvement to test	Ben Soares	More...				about 1 year ago
JAL-629 Fixed ~ based test for build server	Ben Soares	More...				about 1 year ago
JAL-629 Add substituteHomeDir to getDirname(). Tighten dirname tests	Ben Soares	More...				about 1 year ago
JAL-629 Put old -props back as will now use old parser	Ben Soares	More...				about 1 year ago
JAL-629 Fix non-multi string bootstrap arg bug.	Ben Soares	More...				about 1 year ago
JAL-629 setprop test disabled as feature is disabled	Ben Soares	More...				about 1 year ago
JAL-629 parse SubVals once with ArgValue. Ensure SubVals exists. Change to setprops in Jalview.java comment	Ben Soares	More...				about 1 year ago
JAL-629 allow argfiles in argfiles, but avoid looping argfiles	Ben Soares	More...				about 1 year ago
JAL-629 allow comments in argfiles '#'	Ben Soares	More...				about 1 year ago
JAL-629 DON'T use quotation marks in argfiles as they are not interpreted (or needed)	Ben Soares	More...				about 1 year ago
JAL-629 Tests for FileUtils. Tidying counter substitutions. Fixing PAE opening.	Ben Soares	More...				about 1 year ago
JAL-629 more info in usage statement	Ben Soares	More...				about 1 year ago
JAL-629 Start of Usage statement	Ben Soares	More...				about 1 year ago
JAL-629 More consistent printing of --arguments. Example nf-core argfile	Ben Soares	More...				about 1 year ago
JAL-629 Remove debugging comment	Ben Soares	More...				about 1 year ago
JAL-629 --initsubstitutions as a bootstrap arg, new tests	Ben Soares	More...				about 1 year ago
JAL-629 sort files from java glob for predictability. reduce maxdepth of walkfiletree	Ben Soares	More...				about 1 year ago
JAL-629 Removed --headless to fix CommandsTest	Ben Soares	More...				about 1 year ago
JAL-629 added setprop. More filename based substitutions enabled. Test for these.	Ben Soares	More...				about 1 year ago
Merge branch 'features/JAL-4134_treeviewerforcolumns' into develop	James Procter	More...				about 1 year ago
JAL-629 More extensive tests with real files being opened	Ben Soares	More...				about 1 year ago
JAL-629 fix bug for opening single named file with no args	Ben Soares	More...				about 1 year ago

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