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Analyzed 3 months ago. based on code collected 3 months ago.

Commit Message	Contributor	Files Modified	Lines Added	Lines Removed	Code Location	Date
Feb 13, 2023 — Feb 13, 2024 Showing page 5 of 30 Search / Filter on:
Merge branch 'improvement/JAL-3783_upgrade_to_groovy-4' into jims/bug/JAL-4298_java_console_causing_hang_at_startup	James Procter	More...				6 months ago
JAL-4298 Remove a stray return in the processGroovyScript method. Mildy improve a groovy example. Ensure consistent setting of groovy variables with JalviewObjectI fields. Update the currentAlFrame when run from Calculate menu.	Ben Soares	More...				6 months ago
JAL-4298 reuse existing log level preference method	James Procter	More...				6 months ago
JAL-4307 also report molecule name in tooltip for show/hide HETATM	James Procter	More...				6 months ago
JAL-4298 another implicated line	Ben Soares	More...				6 months ago
Merge branch 'feature/JAL-4307_hetatm_showhide' into develop	James Procter	More...				6 months ago
Merge branch 'patch/JAL-4298_synchronize_consoledoc' into develop	James Procter	More...				6 months ago
JAL-4307 some models return null for hetatm list	James Procter	More...				6 months ago
JAL-4298 try much harder to avoid modifying console gui anywhere outside swing worker threads	James Procter	More...				6 months ago
Merge branch 'patch/JAL-4298_synchronize_consoledoc' into bug/JAL-4298_java_console_causing_hang_at_startup	Ben Soares	More...				7 months ago
JAL-629 Fix --nodebug turning off debug mode from properties	Ben Soares	More...				7 months ago
JAL-4298 comment markers	Ben Soares	More...				7 months ago
Merge branch 'improvement/JAL-3783_upgrade_to_groovy-4' into bug/JAL-4298_java_console_causing_hang_at_startup	Ben Soares	More...				7 months ago
JAL-4298 avoid deadlock waiting to update doc when doc is being used by gui thread waiting for thread to update the doc	James Procter	More...				7 months ago
JAL-4305 Isolate and unify the Jalview object from all the gubbins in jalview.bin.Jalview or jalview.gui.Desktop with a JalviewObject interface. Adjust/fix some example groovy scripts.	Ben Soares	More...				7 months ago
JAL-4307 View->Ligands submenu, implementation for Jmol and documentation	James Procter	More...				7 months ago
Merge branch 'develop' into releases/Release_2_11_3_Branch	James Procter	More...				7 months ago
Merge branch 'improvement/JAL-3783_upgrade_to_groovy-4' into bug/JAL-4298_java_console_causing_hang_at_startup	Ben Soares	More...				7 months ago
JAL-629 Run non-alignframe linked groovy scripts. Use multiple specified groovy scripts. Don't add a warning for image and output if not asked for	Ben Soares	More...				7 months ago
JAL-4262 Fix the nonblockingdialog so that Jalview desktop isn't left set to alwaysOnTop	Ben Soares	More...				7 months ago
Merge branch 'doc/JAL-4090_Release_2_11_3_0' into develop	James Procter	More...				7 months ago
JAL-4090 JAL-4303 as known defect	James Procter	More...				7 months ago
Merge branch 'bug/JAL-4302_treeheightrendererbroke' into develop	James Procter	More...				7 months ago
Merge branch 'doc/JAL-4090_Release_2_11_3_0' into develop	James Procter	More...				7 months ago
JAL-4090 JAL-4302 marked as known defect	James Procter	More...				7 months ago
JAL-4134 TODO printNode update for columnTrees	James Procter	More...				7 months ago
JAL-4134 JAL-4302 remove unnecessary casts	James Procter	More...				7 months ago
JAL-4090 JAL-4089 document use of selected columns for superposition, and add links to Pymol for individual viewer capabilities	James Procter	More...				7 months ago
Merge branch 'bug/JAL-4089_selectedcolshiddenregions' into develop	James Procter	More...				7 months ago
JAL-4089 selected columns are reported in absolute column numbers, not visible columns	James Procter	More...				7 months ago

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