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Commits
: Listings
Analyzed
3 months
ago. based on code collected
3 months
ago.
Feb 13, 2023 — Feb 13, 2024
Showing page 7 of 30
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JAL-244 ensure background is completely filled with white
James Procter
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7 months ago
JAL-4090 JAL-4291 disable failing test and note as new knowndefect
James Procter
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7 months ago
JAL-244 attempt to fix broken test - still needs to be fixed!
James Procter
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7 months ago
JAL-244 export image with full width IDs regardless of UI
James Procter
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7 months ago
JAL-244 JAL-4091 allow calculation of label id width off screen including sequence ids for sequence associated annotation
James Procter
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7 months ago
JAL-244 JAL-4091 FIXME for JAL-3362 patch testCalculateIdWidth_withMaxWidth test for new annotation label marks
James Procter
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7 months ago
JAL-4160 update args used in test suite for new CLI framework
James Procter
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7 months ago
JAL-4217 move CommandsTest to testTask3 involving structure image export and random NPE in commandsOpen test on osx
James Procter
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7 months ago
Merge branch 'bug/JAL-244_interactingpngexportnotwysiwig' into develop
James Procter
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7 months ago
JAL-629 JAL-4265 JAL-4286 report the filename for the exported structure image like we do for exported alignment images
James Procter
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7 months ago
JAL-4090 JAL-629 FER1+SPIOL -> FER1_SPIOL in command line example
James Procter
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7 months ago
JAL-244 JAL-4090 use current IdWidth when exporting unwrapped alignment image.
James Procter
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7 months ago
JAL-4288 fix up gradle generated getdown launch jvl for bamboo channel builds
James Procter
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7 months ago
JAL-4090 figures in paematrix doc
James Procter
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7 months ago
JAL-4090 fix url to new cli docs
James Procter
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7 months ago
JAL-4153 move JvCacheableInputBoxTest to testTask2
James Procter
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7 months ago
JAL-3858 fix check annotation row and column positioning in case we have been called during an annotation height change operation
James Procter
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7 months ago
JAL-4090 JAL-3855 figure showing PAEs for epas1 homolog structures
James Procter
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7 months ago
JAL-1556 JAL-4090 colour by annotation options on annotation label popup menu
James Procter
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7 months ago
JAL-3858 don’t divide if we only had one value to count
James Procter
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7 months ago
JAL-3858 check annotation row and column positioning in case we have been called during an annotation height change operation
James Procter
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7 months ago
JAL-3858 improved contactInterval computation and added detailed test coverage for ContactGeometry - contactInterval.cStart/cEnd and pStart/pEnd are now base-0 inclusive ranges, always less than contactHeight and graphHeight - change in mapFor behaviour so cStart/cEnd and pStart/pEnd are always just one mapped range, not as many as requested to cover mapFor(pFrom,pTo)
James Procter
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7 months ago
JAL-3858 JAL-4090 pae matrix docs. WIP
James Procter
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7 months ago
JAL-3858 JAL-4090 avoid NPE when given out of bound column ranges when requesting ContactList
James Procter
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7 months ago
JAL-3858 JAL-4090 PAE documentation..
James Procter
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7 months ago
JAL-3858 minimum value for a range is used to shade ranges in PAE map
James Procter
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7 months ago
JAL-3858 javadoc and slightly revised green linear shading - still not a perfect match to EBI AlphaFold
James Procter
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7 months ago
JAL-3858 report PAE range with sensible precision
James Procter
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7 months ago
Merge branch 'develop' into releases/Release_2_11_3_Branch
James Procter
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7 months ago
fix link...
James Procter
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7 months ago
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