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Commits : Listings

Analyzed about 17 hours ago. based on code collected about 17 hours ago.
Sep 17, 2024 — Sep 17, 2025
Commit Message Contributor Files Modified Lines Added Lines Removed Code Location Date
Bump sqStore version number, again, to effectively unlimit the number of blobs, segments and partitions. More... over 7 years ago
Cleanup logging during indexing; don't require an ovFile datafile to exist to load histogram data. More... over 7 years ago
Add accessors to the range of reads with scores, for logging. More... over 7 years ago
Remove a bit of useless logging, and add a blank line (also useless, but at least pretty). More... over 7 years ago
Minor: change case of variable name. More... over 7 years ago
Add a mountain of script-friendly dump options. More... over 7 years ago
Fix printf() format. More... over 7 years ago
Add ability to fetch individual sqStore and ovStore data files from object storage. More... over 7 years ago
Remove ability of compressing (other than snappy) overlap files. More... over 7 years ago
Remove dead code previously used for updating counts of reads in gkStoreInfo. More... over 7 years ago
Keep track of the number of blob files created. Bumps version number of sqStore. More... over 7 years ago
Trivial: add a ./ to a path. More... over 7 years ago
Add two CANU_OBJECT_STORE_* environment variables to all scripts. More... over 7 years ago
Add an initializer for Grid_Cloud. More... over 7 years ago
Don't require a blobs file to be present to detect a Canu seqStore. More... over 7 years ago
Fix 'big' typo in comment. Even the itty-bitty fixes are important! More... over 7 years ago
Reimplement splitToWords so it can split path names too. More... over 7 years ago
Don't use splitToWords for a single word. More... over 7 years ago
Fix object storage of partitioned sequence data in consensus. More... over 7 years ago
Remove unuseful early termination during objectStore=TEST. More... over 7 years ago
Fix minor logging annoyances. More... over 7 years ago
Remove the seqStore symlink in subdirectories. More... over 7 years ago
Report unitigger.err if it fails. More... over 7 years ago
Clarify description of mhapBlockSize. More... over 7 years ago
Reimplement the utgcns 'package' support, now called import/export, and add it to falconsense. More... over 7 years ago
Add complementary bases for N (which is N), issue #880 and #881 More... over 7 years ago
Disable useless logging when building partitioned store. More... over 7 years ago
Remove dead code from dumping old falconsense inputs. More... over 7 years ago
Remove redundant fetchSeqStore() calls. More... over 7 years ago
Improve detection of the mode (-correct, etc) based on the reads in the store and/or input files. More... over 7 years ago