MultiQC is a tool to create a single report with interactive plots for multiple bioinformatics analyses across many samples.
MultiQC is written in Python (tested with v2.7, 3.4, 3.5 and 3.6). It is available on the Python Package Index and through conda using Bioconda.
Reports are generated by scanning given directories for recognised log files. These are parsed and a single HTML report is generated summarising the statistics for all logs found. MultiQC reports can describe multiple analysis steps and large numbers of samples within a single plot, and multiple analysis tools making it ideal for routine fast quality control.
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