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ngs-workflows

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Analyzed about 15 hours ago. based on code collected 1 day ago.

Commit Message	Contributor	Files Modified	Lines Added	Lines Removed	Code Location	Date
May 16, 2023 — May 16, 2024 Showing page 3 of 5 Search / Filter on:
slight modification to CLIScripting Added Capture of Research Data and Analysis Metadata to ProjectOrg	Darin London	More...				over 11 years ago
only 4 sessions, with some dual subject sessions	Darin London	More...				over 11 years ago
will cover CLIScripting and Toolkits in one session	Darin London	More...				over 11 years ago
switched order, will add file/analysis metadata to ProjectOrg	Darin London	More...				over 11 years ago
RCS.pptx moved from session4 to session5, and complete	Darin London	More...				over 11 years ago
Almost finished with days structure RCS complete	Darin London	More...				over 11 years ago
finished RCS	Darin London	More...				over 11 years ago
RCS started	Darin London	More...				over 11 years ago
finshed	Darin London	More...				over 11 years ago
added fastqc picture	Rutger Vos	More...				over 11 years ago
now completed slides day1/session1	Rutger Vos	More...				over 11 years ago
Merge branch 'master' of github.com:rvosa/ngs-workflows	Rutger Vos	More...				over 11 years ago
added more reference materials	Rutger Vos	More...				over 11 years ago
updated slides for day4	Rutger Vos	More...				over 11 years ago
added more links	Rutger Vos	More...				over 11 years ago
changed the name and function of bin/filter_sam_unaligned.pl to filter_sam.pl added day2/session2 powerpoint on Sam format and filtering	Darin London	More...				over 11 years ago
wrapper around instructions for getting bwa	Darin London	More...				over 11 years ago
intro to BWA and Samtools	Darin London	More...				over 11 years ago
does not need to samtools index the reference, and uses simpler samtools view -bS to go from sam to sorted bam	Darin London	More...				over 11 years ago
Adding MPI example scripts	Rutger Vos	More...				over 11 years ago
Merge branch 'master' of github.com:rvosa/ngs-workflows	Rutger Vos	More...				over 11 years ago
updated slides	Rutger Vos	More...				over 11 years ago
Merge branch 'master' of [email protected]:rvosa/ngs-workflows	Darin London	More...				over 11 years ago
fixed to download the fna instead of faa Plasmodium_falciparum_OLD reference genome. changes the header to just the chromosome number for easier reference in the alignment output	Darin London	More...				over 11 years ago
added github help link	Rutger Vos	More...				over 11 years ago
added more links	Rutger Vos	More...				over 11 years ago
more links	Rutger Vos	More...				over 11 years ago
added link to advanced bash scripting guide	Rutger Vos	More...				over 11 years ago
added exercise	Rutger Vos	More...				over 11 years ago
adding toy fastqvalidate script	Rutger Vos	More...				over 11 years ago

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