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Analyzed about 2 months ago. based on code collected about 2 months ago.
Posted 7 days ago by mtbcarroll
I just ran into this bug again with problem-name.ome.xml from ​https://trello.com/c/fbJ6jMvZ/399-ignores-plate-names-in-naming-fields - mtbc@ls28101:/tmp$ < problem-name.ome.xml grep Image: mtbc@ls28101:/tmp$ showinf ... [More] -nopix -omexml-only problem-name.ome.xml | grep Image: mtbc@ls28101:/tmp$ [Less]
Posted 8 days ago by mtbcarroll
Cc changed the server should be throwing an ApiUsageException itself and not the InternalException. From ​https://www.openmicroscopy.org/qa2/qa/feedback/20621/ - Caused by: omero.InternalException serverStackTrace = "omero.ApiUsageException ... [More] serverStackTrace = (null) serverExceptionClass = (null) message = "Image:31 is too large for export (sizeX=20777, sizeY=7152)" I can't tell if that aspect remains a bug. [Less]
Posted 12 days ago by mtbcarroll
Just confirmed on current OMERO develop which I'm guessing is at least BF 5.7.3.
Posted about 1 month ago by mlinkert
needfunding: As far as I can tell, there is no existing Java library to do this across all supported platforms. JAI 1.1.2 out of the box does not register a lossless JPEG writer on my local Linux system. Obvious projects flagged for watching via ... [More] Trello also do not appear to support lossless or JPEG-LS writing: ​https://trello.com/c/CPmTdR4c/170-commons-imaging ​https://trello.com/c/mRmYOib8/205-twelvemonkeys-imageio The closest I can find to a working open source library is ​https://github.com/team-charls/charls, which is in C++. Unless any better ideas, I assume this would require a project similar to what was done for JPEG-XR via jxrlib, which requires significant interest and funding. [Less]
Posted about 1 month ago by mlinkert
needfunding: As far as I can tell, there is no existing Java library to do this across all supported platforms. JAI 1.1.2 out of the box does not register a lossless JPEG writer on my local Linux system. Obvious projects flagged for watching via ... [More] Trello also do not appear to support lossless or JPEG-LS writing: ​https://trello.com/c/CPmTdR4c/170-commons-imaging ​https://trello.com/c/mRmYOib8/205-twelvemonkeys-imageio The closest I can find to a working open source library is ​https://github.com/team-charls/charls, which is in C++. Unless any better ideas, I assume this would require a project similar to what was done for JPEG-XR via jxrlib, which requires significant interest and funding. [Less]
Posted about 1 month ago by mlinkert
fixed: PR open: ​https://github.com/openmicroscopy/bioformats/pull/3109
Posted about 1 month ago by mlinkert
fixed: PR open: ​https://github.com/openmicroscopy/bioformats/pull/3109
Posted about 1 month ago by mlinkert
fixed: PR open: ​https://github.com/openmicroscopy/bioformats/pull/3100
Posted about 1 month ago by mlinkert
fixed: PR open: ​https://github.com/openmicroscopy/bioformats/pull/3100
Posted about 1 month ago by mlinkert
Owner changed Corresponding Trello card: ​https://trello.com/c/lMTDufbP/112-cellsensreader-image-dimensions-bug