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rna-seq-diff-exprn

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Analyzed about 11 hours ago. based on code collected about 17 hours ago.

Commit Message	Contributor	Files Modified	Lines Added	Lines Removed	Code Location	Date
Apr 19, 2023 — Apr 19, 2024 Showing page 1 of 2 Search / Filter on:
edits since blog post	Olga Botvinnik	More...				over 11 years ago
Cleaned up README.md some more, added usage and examples	Olga Botvinnik	More...				over 11 years ago
added merge_columns.sh to 'other useful scripts' in README.md	Olga Botvinnik	More...				over 11 years ago
fixing get_gene_density.R description in README.md, try 3	Olga Botvinnik	More...				over 11 years ago
fixing get_gene_density.R description in README.md, try 2	Olga Botvinnik	More...				over 11 years ago
fixing get_gene_density.R description in README.md	Olga Botvinnik	More...				over 11 years ago
Added instructions on how to run the example in the readme file	Olga Botvinnik	More...				over 11 years ago
removed verbose messages in sh files	Olga Botvinnik	More...				over 11 years ago
Removed debugging comments	Olga Botvinnik	More...				over 11 years ago
DESeq is fully working!	Olga Botvinnik	More...				over 11 years ago
added code to write code for heatmap plotting reproducibility	Olga Botvinnik	More...				over 11 years ago
rerunning, committing again	Olga Botvinnik	More...				over 11 years ago
finally committing through github the osx app, hopefully this syncs.	Olga Botvinnik	More...				over 11 years ago
added test-results/, DESeq still not fully working	Olga Botvinnik	More...				over 11 years ago
making make_expression_common.sh to make test-results/expression/expression_common.R	Olga Botvinnik	More...				over 11 years ago
making a big gene counts table works!	Olga Botvinnik	More...				over 11 years ago
making a huge table of all the transcript counts works!	Olga Botvinnik	More...				over 11 years ago
Reformatted README file	Olga Botvinnik	More...				almost 12 years ago
Circos plotting works for everyone!	Olga Botvinnik	More...				almost 12 years ago
circos plotting of everything on one plot works!	Olga Botvinnik	More...				almost 12 years ago
group gene counts worksgit add scripts/*	Olga Botvinnik	More...				almost 12 years ago
circos works!!"	Olga Botvinnik	More...				almost 12 years ago
circos.sh halfway working	Olga Botvinnik	More...				almost 12 years ago
All RSeQC works reasonably well	Olga Botvinnik	More...				almost 12 years ago
added removal of 'track name' line in BED file	Olga Botvinnik	More...				almost 12 years ago
fixed bed/id_symbol file mixup	Olga Botvinnik	More...				almost 12 years ago
everything works up to starting the loop over the different samples	Olga Botvinnik	More...				almost 12 years ago
finished writing descriptions in pipeline.sh, now fixing quoting issues	Olga Botvinnik	More...				almost 12 years ago
Removed unruly .err and .without_comments files	Olga Botvinnik	More...				almost 12 years ago
Added list of dependencies in README	Olga Botvinnik	More...				almost 12 years ago

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