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Analyzed about 1 hour ago. based on code collected about 7 hours ago.

Commit Message	Contributor	Files Modified	Lines Added	Lines Removed	Code Location	Date
Apr 23, 2023 — Apr 23, 2024 Showing page 1 of 8 Search / Filter on:
Bump version number to 0.21.	c4chris	More...				over 12 years ago
Do not report 0-length polyA.	c4chris	More...				over 12 years ago
Add force_mRNA_plus_strand.	c4chris	More...				almost 14 years ago
Bump version number to 0.20.	c4chris	More...				over 14 years ago
slide_intron(): Improve detection of absorbed exons.	c4chris	More...				over 14 years ago
slide_intron(): Improve the removal of absorbed exons while sliding introns.	c4chris	More...				over 14 years ago
Bump version number to 0.19.	c4chris	More...				over 14 years ago
msp2exons(): do not merge when there is a gap longer than MIN_INTRON in the RNA piece.	c4chris	More...				over 14 years ago
about_same_gap_p() returns true when the remaining gap is smaller than MIN_INTRON.	c4chris	More...				over 14 years ago
Fix compiler warning.	c4chris	More...				over 14 years ago
Modify splice_score_compare() to penalyze scores with non-perfect splices and give preference to canonical splices.	c4chris	More...				over 14 years ago
Bump version number to 0.18.	c4chris	More...				over 14 years ago
Update copyright year.	c4chris	More...				over 14 years ago
Watch and remove absorbed exons while sliding introns.	c4chris	More...				over 14 years ago
Add -S command line option and set to 2 (instead of 1 before) by default.	c4chris	More...				over 14 years ago
Fix logo link as per request.	c4chris	More...				about 15 years ago
Version 0.17.	c4chris	More...				almost 16 years ago
Bump version number to 0.17.	c4chris	More...				about 16 years ago
Add -H option.	c4chris	More...				about 16 years ago
Fix gcc 4.3 conversion warnings.	c4chris	More...				about 16 years ago
Add -Wconversion and cleanup warnings.	c4chris	More...				about 16 years ago
Use percentage for -H chimera option.	c4chris	More...				about 16 years ago
Do chimera hunting in parallel with normal processing, and keep best result.	c4chris	More...				about 16 years ago
Implement chimera hunter.	c4chris	More...				about 16 years ago
Perfect splice score is 24.	c4chris	More...				over 16 years ago
Fix a few typos.	c4chris	More...				over 16 years ago
Update for 0.16.	c4chris	More...				over 16 years ago
Bump version number to 0.16.	c4chris	More...				over 16 years ago
Keep track of RNA coverage when looking for duplicated genes (cut down excessive runtime).	c4chris	More...				over 16 years ago
Check multiple coverage before looking for duplicates.	c4chris	More...				over 16 years ago

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