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SunlightCBM

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Commits : Listings

Analyzed about 8 hours ago. based on code collected about 13 hours ago.

Commit Message	Contributor	Files Modified	Lines Added	Lines Removed	Code Location	Date
Apr 26, 2023 — Apr 26, 2024 Showing page 1 of 3 Search / Filter on:
Small tweaks	patrickbwarren	More...				almost 9 years ago
Updated cytoscape output.	patrickbwarren	More...				over 9 years ago
extracts compartment names from sbml	patrickbwarren	More...				almost 10 years ago
updated to SWIG v2.0.11, libSBML v5.10.0, GLPK v4.52.1	patrickbwarren	More...				almost 10 years ago
Exposed internal reaction data structures.	patrickbwarren	More...				about 11 years ago
Added shortcuts.	patrickbwarren	More...				over 11 years ago
Compact bounds options added.	patrickbwarren	More...				over 11 years ago
minor fixes; works with libSBML 5.5.0 and GLPK 4.43, compiles with swig 2.0.4	patrickbwarren	More...				almost 12 years ago
Update to work with latest libsbml-4.3.0 and glpk-4.43	patrickbwarren	More...				about 13 years ago
Added partial documentation	patrickbwarren	More...				about 13 years ago
Fixed off-by-one error in WriteCode in SunlightCBM.pm; added -e option to dictionary.pl	patrickbwarren	More...				almost 15 years ago
Implemented C code generation and sample driver file (driver target in Makefile)	patrickbwarren	More...				about 15 years ago
Added codegen.pl and associated code generation files (new target 'driver' in Makefile)	patrickbwarren	More...				about 15 years ago
Corrected missing "1+" which could lead very infrequently to wrong results.	patrickbwarren	More...				over 15 years ago
export stoichiometry now takes into account scale factors	patrickbwarren	More...				almost 16 years ago
Corrected counting in DualVariability and Variability	patrickbwarren	More...				almost 16 years ago
Added --from-file and --for-metabolite options to dualvar.pl	patrickbwarren	More...				almost 16 years ago
added --stoichiometry option	patrickbwarren	More...				almost 16 years ago
Atom count now includes all species	patrickbwarren	More...				almost 16 years ago
Fixed makefile.	patrickbwarren	More...				about 16 years ago
Updated documentation a bit.	patrickbwarren	More...				about 16 years ago
Fixed error in --help option.	patrickbwarren	More...				about 16 years ago
Added --no-schema option.	patrickbwarren	More...				about 16 years ago
Added --for-reaction and --from-file options.	patrickbwarren	More...				about 16 years ago
Allowed --for-reaction and --from-file in variability studies.	patrickbwarren	More...				about 16 years ago
Added --close-exchanges option.	patrickbwarren	More...				about 16 years ago
Added deletion.pl and subroutines.	patrickbwarren	More...				about 16 years ago
Fixed --exclude-exchanges -> --except-exchanges.	patrickbwarren	More...				about 16 years ago
Changed --exclude-exchanges to --except-exchanges.	patrickbwarren	More...				about 16 years ago
Added a level of indirection for biomass demand reactions.	patrickbwarren	More...				about 16 years ago

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