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Chaste

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  Analyzed 8 days ago

Chaste - Cancer Heart And Soft Tissue Environment Chaste is a computational biology simulation package. It provides a cardiac simulation package which provides a way to use CellML electrophysiology models in tissue simulations. The cardiac code is suitable for high performance computing on large ... [More] supercomputers. The cell-based side of the code provides a variety of agent-based models (cellular automata, cell-centre-based (on and off mesh), cell vertex, cellular Potts models) for use in biological settings where cells divide and die according to other models. For details please see the recent overview paper in PLoS Computational Biology www.ploscompbiol.org/article/info%3Adoi%2F10.1371%2Fjournal.pcbi.1002970 [Less]

1.44M lines of code

9 current contributors

11 days since last commit

3 users on Open Hub

High Activity
5.0
 
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OpenCOR

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  Analyzed about 4 hours ago

OpenCOR is a cross-platform modelling environment which can be used to organise, edit, simulate and analyse CellML files.

114K lines of code

2 current contributors

about 1 month since last commit

2 users on Open Hub

Very Low Activity
5.0
 
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Functional Curation Web Interface

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  Analyzed about 17 hours ago

Provides a user-friendly web interface to the Functional Curation system for evaluating and comparing mathematical models of biological systems under a range of experimental scenarios.

102K lines of code

0 current contributors

almost 6 years since last commit

2 users on Open Hub

Inactive
0.0
 
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ApPredict Web Portal

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  Analyzed about 7 hours ago

Collection of components which provide a web interface to cardiac action potential prediction under blockade of cardiac ion channels.

183K lines of code

3 current contributors

9 months since last commit

0 users on Open Hub

Very Low Activity
0.0
 
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ApPredict

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  No analysis available

ApPredict is a free open source program for prediction of action potential changes under drug-block of ion channels. The ion channel block is modelled as conductance block, and it can be used with a number of action potential models (specified using CellML), different pacing rates. Blockade of ... [More] the following ion channels can be included: IKr (hERG), IKs (KCNQ1), ICaL (CaV1.2), INa (NaV1.5), Ito (Kv4.3), IK1 (KCNN4). [Less]

0 lines of code

1 current contributors

0 since last commit

0 users on Open Hub

Activity Not Available
0.0
 
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Mostly written in language not available
Licenses: BSD-3-Clause