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SequenceServer
S
Analyzed about 3 hours ago
A simple web front end to NCBI BLAST+ that lets users share, and consume sequence data intuitively.
"The iPod of Blast searching"
Set up your local BLAST server in minutes...
Licenses:
No declared licenses
MUMmerGPU
M
Analyzed about 15 hours ago
MUMmerGPU is a high-throughput DNA sequence alignment program that runs on nVidia G80-class GPUs. It aligns sequences in parallel on the video card to achieve a more than 3-fold speedup over the widely used serial CPU program MUMmer.
Licenses:
Artistic_...
ngs
N
Analyzed about 23 hours ago
Next generation sequencing (NGS/HTS) tools.
Licenses:
lgpv3_or_...
JAligner
J
No analysis available
JAligner is an open source Java implementation of the dynamic programming algorithm Smith-Waterman with Gotoh's improvement for biological local pairwise sequence alignment with the affine gap penalty model.
Mostly written in language not available
Licenses:
No declared licenses
Blat-like Fast Accurate Search Tool
B
No analysis available
BFAST facilitates the fast and accurate mapping of short reads to reference sequences, where mapping billions of short reads with variants is of utmost importance.
Mostly written in language not available
Licenses:
No declared licenses