Tags : Browse Projects

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GenoViz

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  Analyzed about 13 hours ago

The GenoViz project provides tools for genomics data visualization. It consists of the following: 1) the GenoViz SDK, a library of re-usable components, 2) the Genometry data model to represent relationships between biological sequences, and 3) the Integrated Genome Browser (IGB, "igbee"), an ... [More] application built upon the GenoViz SDK and Genometry for visualization and exploration of genomes and corresponding annotations from multiple data sources. IGB supports the Distributed Annotation System (DAS) protocol, version 1 and 2, as well as other optimized binary data formats that are designed for efficient exploration of large, whole genome data sets. [Less]

203K lines of code

10 current contributors

2 months since last commit

4 users on Open Hub

Moderate Activity
5.0
 
I Use This

Bika Open Source LIMS 3

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  Analyzed 10 days ago

Code analysis here refers to version 3 of Bika's Free and Open Source laboratory information management systems for ISO 17025 compliant applications in agriculture, water quality management, environmental monitoring, food and beverages, public health, bio-informatics and inter-laboratory proficiency ... [More] testing. Bika combines web content management and workflow processing for a one-stop LIMS portal · Built in Plone · Professionally supported NB For the full code analysis, including Bika 1 and 2, please see archived statistics at Bikalabs.org - 7,781 commits, 37 contributors, 740816 lines of code, 201 years of effort at estimated cost of $11,050,000 bika (bi:ka Zulu trad) - report, from clan to clan, bring news of weddings, births, festivals and funerals tell it as it is [Less]

192K lines of code

14 current contributors

23 days since last commit

3 users on Open Hub

High Activity
5.0
 
I Use This

dANN

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  Analyzed over 1 year ago

The dANN project is a library to help facilitate artificial neural networks within other applications. It is currently written in Java, C++, and C#. However only the java version is currently in active development. If you want to obtain a version other than the java version you will need to get it ... [More] directly from GIT. Our intentions are two fold. First, to provide a powerful interface for programs to include conventional artificial neural network technology into their code. Second, To act as a testing ground for research and development of new AI concepts. We provide new AI technology we have developed, and the latest algorithms already on the market. In the spirit of modular programming the library also provides access to the primitive components giving you greater control. [Less]

8.32K lines of code

1 current contributors

over 2 years since last commit

2 users on Open Hub

Activity Not Available
5.0
 
I Use This

cloudbiolinux

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  Analyzed 10 days ago

CloudBioLinux: configure virtual (or real) machines with tools for biological analyses

11.9K lines of code

11 current contributors

15 days since last commit

2 users on Open Hub

Moderate Activity
0.0
 
I Use This

Collagene

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  Analyzed 14 days ago

Software for cloning

13.5K lines of code

0 current contributors

over 2 years since last commit

1 users on Open Hub

Inactive
0.0
 
I Use This

Beached Whale Frameshift

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  Analyzed over 1 year ago

This computes protein yield and reading frame displacement given a sequence of codons in addition to writing an infinite amount of tools to analyze or help generate those metrics. Throw in Perl for extra sexiness.

2.74K lines of code

0 current contributors

over 8 years since last commit

1 users on Open Hub

Activity Not Available
5.0
 
I Use This
Licenses: BSD-3-Clause, GPL-2.0+

Madeline

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  Analyzed 8 days ago

The Madeline 2.0 Pedigree Drawing Engine is a pedigree drawing program designed to handle large and complex pedigrees with an emphasis on readability and aesthetics. Although the program takes inspiration from Madeline v. 0.935, the Madeline 2.0 Pedigree Drawing Engine, or just Madeline 2.0 for ... [More] short, is in fact a completely new program written from scratch. [Less]

56.3K lines of code

2 current contributors

12 months since last commit

1 users on Open Hub

Very Low Activity
5.0
 
I Use This

bio-charm

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  Analyzed 24 days ago

CHarm provides codon harmonization for heterologous expression systems.

552 lines of code

0 current contributors

over 3 years since last commit

1 users on Open Hub

Inactive
0.0
 
I Use This

MOLGENIS model-driven database platform

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  Analyzed 9 days ago

MOLGENIS can be used to generate databases for life science experiments (micrroarray, mass spectrometry, genomics) having a web user interface, csv exchange format, and programmatic interfaces (web services, rest, and r-project). See NatRevGen 8.

425K lines of code

20 current contributors

13 days since last commit

1 users on Open Hub

Very High Activity
4.0
   
I Use This
Licenses: No declared licenses

R/qtl

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  Analyzed 9 days ago

R/qtl: A QTL mapping environment

87.2K lines of code

2 current contributors

about 2 months since last commit

1 users on Open Hub

Low Activity
5.0
 
I Use This
Licenses: No declared licenses