GNAT is a library and web service capable of performing gene entity NER and normalization of biomedical articles. Mentions of genes and proteins in the articles are linked to to Entrez Gene identifiers. GNAT is available both for local download (suitable for large-scale processing) and as a web
... [More] service (suitable for more limited processing or testing). A combination of local and remote processing is also available, where CPU-heavy operations are performed locally and memory-intensive operations are performed remotely (this is suitable for large-scale processing where a large amount of memory is not available). GNAT uses LINNAEUS (Gerner et al., 2010) for species detection and BANNER (Leaman et al., 2008) in one part of its false positive filtering process. [Less]
Based on the abandoned wp-publications-archive project hosted on Google Code!
WP Publication Archive adds a custom content type for storing, tagging, and categorizing downloadable content external to standard WordPress posts and pages. You can add downloadable PDF files, Word documents, and
... [More] PowerPoint presentations. These files will be stored in the standard WordPress uploads directory but will be managed separately through a custom post type interface in the WordPress admin area. [Less]
CABLE is a date-based, multi-user content management/publishing system. It is fully themeable, extensible, and highly modular. Default plugins allow for a blog-based publication model, although plugins may be written to allow for virtually limitless applications. CABLE utilizes MySQL databases, and
... [More] is extremely fast by virtue of aggressive caching and low overhead. [Less]