Remove Bio::SeqIO support for abi, alf, ctf, exp, pln, and ztr. |
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over 5 years ago
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Bio::Cluster and Bio::ClusterIO moved to their own separate distribution |
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over 5 years ago
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Bio::Phenotype::* move what's left of the namespace to its own distribution. |
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over 5 years ago
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maint: remove no longer used test data files. |
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over 5 years ago
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Bio::LiveSeq::* move whole namespace to its own distribution. |
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over 5 years ago
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maint: update gitignore rules |
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over 5 years ago
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t/AlignIO/AlignIO.t: fix number of tests in plan (fixup c523e6bed866) |
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over 5 years ago
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t/Annotation/Annotation.t: remove test for Bio::SeqFeature::Annotated |
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over 5 years ago
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Bio/Tools/Run/Phylo/PhyloBase.pm: bring base class from BioPerl-Run. |
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over 5 years ago
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lib/Bio/Tools/Run/Phylo/PhyloBase.pm: move to the BioPerl distribution. |
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over 5 years ago
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Bio/Tools/Run/Phylo/Gumby.pm: move to its own distribution |
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over 5 years ago
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Bio/Tools/Phylo/Gumby.pm: move to its own distribution |
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over 5 years ago
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DB/SeqFeature/Store/berkeleydb3.pm: fix errors so it compiles (issue #284) |
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over 5 years ago
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Adjust tests indirectly making use of Bio::AlignIO::stockholm (issue #288) |
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over 5 years ago
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maint: restructure to use Dist::Zilla |
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over 5 years ago
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bp_process_wormbase: move program to new Bio-DB-Ace distribution |
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over 5 years ago
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bp_netinstall: remove out of date program |
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over 5 years ago
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Add modules making use Bio::Ext::Align |
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over 5 years ago
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Move modules dependent on Bio::Ext::Align into defunct bioperl-ext |
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over 5 years ago
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Bio::DB::Expression: move to defunct bioperl-microarray |
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over 5 years ago
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maint: 644 permissions for almost all files |
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over 5 years ago
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maint: set all source code with utf-8 encoding |
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over 5 years ago
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maint: remove maintainer out of date files |
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over 5 years ago
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ide: remove module templates - no longer needed after Pod::Weaver |
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over 5 years ago
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ide/bioperl-mode: into its own repository to be developed separately |
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over 5 years ago
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maint: remove bioperl-mode release tarballs from version control |
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over 5 years ago
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Bio::Index::Abstract->_type_and_version: check type before version (issue #281) |
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over 5 years ago
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t/LocalDB/Index/BlastTable.t: use tempdir to avoid clashes in parallel (issue #281) |
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over 5 years ago
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t/LocalDB/Index/Blast.t: create test tempfiles within a tempdir (issue #281) |
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over 5 years ago
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maint: remove unused test data files |
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over 5 years ago
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