22
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Commits : Listings

Analyzed 1 day ago. based on code collected 3 days ago.
May 29, 2023 — May 29, 2024
Commit Message Contributor Files Modified Lines Added Lines Removed Code Location Date
try bsd_glob() to get rid of dep warning in perl 5.26 More... over 6 years ago
fix precedence More... over 6 years ago
get rid of "False [] range "\w-" in regex" warnings More... over 6 years ago
get rid of "Bio::DB::IndexedBase::_strip_crnl redefined" error; it only needs to be defined at class loading in a BEGIN block (once), not every time More... over 6 years ago
Let's make sure it's actually returning something though More... over 6 years ago
Don't run a test checking the absolute value of the status if the answer is uncertain More... over 6 years ago
#261 - Fix hivdb (#262) More... over 6 years ago
Fixes #255. I only added 8 lines at the end of fasta.t. The other changes are due to Atom editor removing whitespace from the ends of lines. More... over 6 years ago
Merge pull request #251 from zmughal/250-precedence-warnings More... over 6 years ago
Merge pull request #254 from bioperl/hyphaltip-bug253-patch-1 More... over 6 years ago
adjust version regex with optional space More... over 6 years ago
codon tables: fix translate with all tables test More... over 6 years ago
Update codon tables to latest data More... over 6 years ago
Fix bug 253 testing for defined More... over 6 years ago
RT #122733: profile has to be renamed to run_profile due to conflict w/ parameter More... over 6 years ago
RT #94872: fix parameters (underscore should be dash) More... over 6 years ago
more ancient artifacts More... over 6 years ago
skip some failing tests due to changes in Bowtie API or additional module requirements More... over 6 years ago
RT #123058, skip if IPC::Run isn't installed More... over 6 years ago
remove ancient artifact More... over 6 years ago
skip if ClustalW wrapper isn't present More... over 6 years ago
Remove Clustalw and TCoffee from list of dependencies
carandraug
as Carnë Draug
More... over 6 years ago
Remove Clustalw and TCoffee which were moved to separate distributions
carandraug
as Carnë Draug
More... over 6 years ago
examples/align/clustalw.pl: remove file, now part of Bio-Tools-Run-Alignment-Clustalw distribution
carandraug
as Carnë Draug
More... over 6 years ago
Change `or` to `||` to fix precedence warning More... over 6 years ago
update Changes doc More... over 6 years ago
fit SABlast skip number More... over 6 years ago
add Bio::FeatureIO as a recommended dist More... over 6 years ago
skip if no Bio::FeatureIO More... over 6 years ago
fix Phastcons and Match, has a req for Bio::FeatureIO More... over 6 years ago