GEMINI_genome_mining

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Analyzed 1 day ago. based on code collected 1 day ago.

Commit Message	Contributor	Files Modified	Lines Added	Lines Removed	Code Location	Date
Sep 14, 2024 — Sep 14, 2025 Showing page 16 of 82 Search / Filter on:
Merge branch 'master' of https://github.com/arq5x/gemini	Brent Pedersen	More...				about 10 years ago
fix for extra error messages reported by Bianca. Also fix comphet python test	Brent Pedersen (brentp)	More...				about 10 years ago
missing file	arq5x	More...				about 10 years ago
hack to appease sphinx on RTD	arq5x	More...				about 10 years ago
needs bcolz?	arq5x	More...				about 10 years ago
needs numpy?	arq5x	More...				about 10 years ago
add a requirements file for RTD. thanks to @bchapman	arq5x	More...				about 10 years ago
clean up gts directories after testing.	arq5x	More...				about 10 years ago
cyvcf2 requires cython>=0.22.1	arq5x	More...				about 10 years ago
add versioning for 0.17.0	arq5x	More...				about 10 years ago
bump to 0.17.0	arq5x	More...				about 10 years ago
Update history.rst	Aaron Quinlan	More...				about 10 years ago
Merge pull request #544 from brentp/comp_het_max_priority	Aaron Quinlan	More...				about 10 years ago
only show confident comp hets by default adjust with --max-priority	Brent Pedersen (brentp)	More...				about 10 years ago
Merge pull request #541 from brentp/no_default_bcolz	Brent Pedersen - Bioinformatics	More...				about 10 years ago
remove all vestiges of --no-bcolz	Brent Pedersen (brentp)	More...				about 10 years ago
Merge branch 'arq5x_master' into no_default_bcolz	Brent Pedersen (brentp)	More...				about 10 years ago
Merge pull request #543 from brentp/skip_info_default	Brent Pedersen - Bioinformatics	More...				about 10 years ago
by default, we dont load the info field.	Brent Pedersen (brentp)	More...				about 10 years ago
Merge pull request #542 from brentp/doc_image	Brent Pedersen - Bioinformatics	More...				about 10 years ago
add image to docs	Brent Pedersen (brentp)	More...				about 10 years ago
Merge pull request #540 from brentp/genewise	Aaron Quinlan	More...				about 10 years ago
don't create bcolz index by default.	Brent Pedersen (brentp)	More...				about 10 years ago
add genewise tests.	Brent Pedersen (brentp)	More...				about 10 years ago
bump cyvcf2 requirement	Brent Pedersen (brentp)	More...				about 10 years ago
Update to IPython 4.0	chapmanb	More...				about 10 years ago
Additional handling of inputs missing ALT alleles	chapmanb	More...				about 10 years ago
Handle no alts in allele-based annotation loading	chapmanb	More...				about 10 years ago
document gene_wise tool	Brent Pedersen (brentp)	More...				about 10 years ago
rename columns and sanity-check input	Brent Pedersen (brentp)	More...				about 10 years ago

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