GEMINI_genome_mining

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Analyzed about 15 hours ago. based on code collected about 15 hours ago.

Commit Message	Contributor	Files Modified	Lines Added	Lines Removed	Code Location	Date
Sep 05, 2024 — Sep 05, 2025 Showing page 35 of 82 Search / Filter on:
Merge pull request #396 from brentp/stale-gbi	Aaron Quinlan	More...				over 10 years ago
check for stale .gbi	Brent Pedersen (brentp)	More...				over 10 years ago
Merge pull request #394 from brentp/document-pre-processing	Aaron Quinlan	More...				over 10 years ago
more clinvar stuffs	Brent Pedersen (brentp)	More...				over 10 years ago
add new test script to master list	Brent Pedersen (brentp)	More...				over 10 years ago
update exac test to match new vcf	Brent Pedersen (brentp)	More...				over 10 years ago
update clinvar tests, prep, and parsing	Brent Pedersen (brentp)	More...				over 10 years ago
Change TPED test expected values to the variant_ids.	roryk	More...				over 10 years ago
update cosmic test. note that we get duplicate ids because the id field can not be split by decompose	Brent Pedersen (brentp)	More...				over 10 years ago
update clinvar script to adjust header to be Number=A for CLN*	Brent Pedersen (brentp)	More...				over 10 years ago
save all clinvar sigs. update to new clinvar codes.	Brent Pedersen (brentp)	More...				over 10 years ago
bump version	Brent Pedersen (brentp)	More...				over 10 years ago
Skip URLs in requirements.txt in setup.py.	roryk	More...				over 10 years ago
Merge branch 'master' into document-pre-processing	Brent Pedersen (brentp)	More...				over 10 years ago
Skip the python-graph-core __init__ hack if installed as a binary egg. Thanks to @brentp	chapmanb	More...				over 10 years ago
Fix issues with python-graph-core and python-graph-dot missing from Google Code. Add conda packages and specific tarballs for installation. Thanks to @brentp and @arq5x	chapmanb	More...				over 10 years ago
Merge branch 'document-pre-processing' of github.com:brentp/gemini into document-pre-processing	Brent Pedersen (brentp)	More...				over 10 years ago
update provenance scripts	Brent Pedersen (brentp)	More...				over 10 years ago
update provenance scripts	Brent Pedersen (brentp)	More...				over 10 years ago
update provenance scripts	Brent Pedersen (brentp)	More...				over 10 years ago
update provenance scripts	Brent Pedersen (brentp)	More...				over 10 years ago
update scripts to handle new annotations	Brent Pedersen (brentp)	More...				over 10 years ago
update scripts to handle new annotations	Brent Pedersen (brentp)	More...				over 10 years ago
update provenance to show tidying of annotation files	Brent Pedersen (brentp)	More...				over 10 years ago
update provenance to show tidying of annotation files	Brent Pedersen (brentp)	More...				over 10 years ago
bump cyvcf req	Brent Pedersen (brentp)	More...				over 10 years ago
bump cyvcf req	Brent Pedersen (brentp)	More...				over 10 years ago
mention GATK limitation	Brent Pedersen (brentp)	More...				over 10 years ago
mention GATK limitation	Brent Pedersen (brentp)	More...				over 10 years ago
add tests	Brent Pedersen (brentp)	More...				over 10 years ago

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