GEMINI_genome_mining

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Analyzed about 4 hours ago. based on code collected about 4 hours ago.

Commit Message	Contributor	Files Modified	Lines Added	Lines Removed	Code Location	Date
Aug 31, 2024 — Aug 31, 2025 Showing page 59 of 82 Search / Filter on:
[DOC] updates docs for comp_hets	arq5x	More...				about 12 years ago
[DOC] add --min-kindreds to auto_rec and auto_dom	arq5x	More...				about 12 years ago
[TST] unit tests for auto_rec tool.	arq5x	More...				about 12 years ago
[TST] unit tests for auto_dom tool.	arq5x	More...				about 12 years ago
backwards compatibility for databases with int phenotypes	arq5x	More...				about 12 years ago
Provide access to gemini isolated python and pip through symlinked 'gemini_python' and 'gemini_pip' commands in the installation path	chapmanb	More...				about 12 years ago
defaults for gt_quals, gt_ref_depths and gt_alt_depths	arq5x	More...				about 12 years ago
typo	arq5x	More...				about 12 years ago
[DOC] opt. curl for installation instructions	arq5x	More...				about 12 years ago
Merge branch 'master' of github.com:arq5x/gemini	arq5x	More...				about 12 years ago
[ENH] add get_json() method to GeminiRow. Can now do \'print row.get_json()\'	arq5x	More...				about 12 years ago
Provide useful error messages if required tools not present: curl for installing data #201	chapmanb	More...				about 12 years ago
Merge pull request #197 from tanglingfung/patch-3	Aaron Quinlan	More...				about 12 years ago
Merge pull request #198 from tanglingfung/patch-2	Aaron Quinlan	More...				about 12 years ago
Update gemini_stats.py	Paul Tang	More...				about 12 years ago
small typos	Paul Tang	More...				about 12 years ago
Provide better flexibility and scaling for PED/FAM input files: split only required parts and allow splitting on any whitespace, not just tabs	chapmanb	More...				about 12 years ago
[DOC] update --calpha docs	arq5x	More...				about 12 years ago
[ENH] prevent calpha from missing splice variants; allow calpha to impose aaf boundaries	arq5x	More...				about 12 years ago
de_novo should allow parents to be HOM_ALT as well	arq5x	More...				about 12 years ago
support backwards compatibility	arq5x	More...				about 12 years ago
tolerate PED files where only one of the two parents is known.	arq5x	More...				about 12 years ago
store sample names and ids as text	arq5x	More...				about 12 years ago
Merge pull request #192 from jxchong/patch-3	Aaron Quinlan	More...				about 12 years ago
optmize comp_het loop to avoid n^2	arq5x	More...				about 12 years ago
revert to numpy 1.6.0 to enable OS X custom installations	arq5x	More...				about 12 years ago
Installation documentation fix: no longer requires ssh, all commands run locally	chapmanb	More...				about 12 years ago
update docs with citation and scipy video.	arq5x	More...				about 12 years ago
Add documentation of the --only-affected option	Jessica Chong	More...				about 12 years ago
update READEME with manuscript.	arq5x	More...				about 12 years ago

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