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Analyzed about 19 hours ago. based on code collected about 19 hours ago.

Commit Message	Contributor	Files Modified	Lines Added	Lines Removed	Code Location	Date
Sep 28, 2024 — Sep 28, 2025 Showing page 21 of 351 Search / Filter on:
Fix bug which would mark end of read anchored in unique as confused	Sergey Koren	More...				over 5 years ago
Disable display of correction scores.	Brian P. Walenz	More...				over 5 years ago
Make all orphans into bubbles temporarely, reads from orphans won't get merged in and they won't break contigs	Sergey Koren	More...				over 5 years ago
More tolerance for shorter bubbles (hardcoded cutoffs for now)	Sergey Koren	More...				over 5 years ago
Remove load/save capability of OverlapCache; it was never updated for canu.	Brian P. Walenz	More...				over 5 years ago
Add -D bestEdges to output intermediate asm.best.edges reports.	Brian P. Walenz	More...				over 5 years ago
Fix spacing on error rate log.	Brian P. Walenz	More...				over 5 years ago
Add -width option for picture displays.	Brian P. Walenz	More...				over 5 years ago
Fix -erate option so 0.01 will show overlaps between 0 and 1%; check value is fraction error not percent.	Brian P. Walenz	More...				over 5 years ago
Update index.rst	Sergey Koren	More...				over 5 years ago
Update README.md	Sergey Koren	More...				over 5 years ago
Update faq.rst	Sergey Koren	More...				over 5 years ago
Update quick-start.rst	Sergey Koren	More...				over 5 years ago
Create .readthedocs.yml	Sergey Koren	More...				over 5 years ago
Update README.md	Sergey Koren	More...				over 5 years ago
Update quick-start.rst	Sergey Koren	More...				over 5 years ago
Update faq.rst	Sergey Koren	More...				over 5 years ago
Update to use threaded-input and 64-mer meryl.	Brian P. Walenz	More...				over 5 years ago
Remove nobest-vs-noseed option, make srue that covGap and lopsided do not have edges.	Brian P. Walenz	More...				over 5 years ago
Rarrange file to be in a more useful order. Cleaned up scoreOverlap() a bit.	Brian P. Walenz	More...				over 5 years ago
fix: add same condition for 3'	Sergey Nurk	More...				over 5 years ago
disable second lopsided pass for good	Sergey Nurk	More...				over 5 years ago
disable reroute after second lopsided filter	Sergey Nurk	More...				over 5 years ago
fix check all relevant connections for confusion	Sergey Nurk	More...				over 5 years ago
lopsided filter threshold update	Sergey Nurk	More...				over 5 years ago
Restore the -covgapolap and -lopsided parameters initially set in 8b1d9d1ab2241ab5ea0f9f51121a936d423ff86a and, somehow, removed in f1e89e431f3150a66ac5258121a7a935a0284858.	Brian P. Walenz	More...				over 5 years ago
temporarily? disable additional length fraction check	Sergey Nurk	More...				over 5 years ago
Don't recompute contained reads after we start removing edges, and do recompute best edges for reads that had edges removed.	Brian P. Walenz	More...				over 5 years ago
Change the scoring of lopsided edges so it makes sense, and to not declare something lopsided if the overlap covers a large fraction of the read.	Brian P. Walenz	More...				over 5 years ago
Add some much needed whitespace.	Brian P. Walenz	More...				over 5 years ago

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