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Inactive
Commits
: Listings
Analyzed
1 day
ago. based on code collected
1 day
ago.
Aug 30, 2024 — Aug 30, 2025
Showing page 24 of 61
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Date
Fixed bug in rendering of N's in mismatch mode.
Eric Smith
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over 14 years ago
Reverting changes to Range so that Java serialization can read files created by Savant 1.4.4. Barf! Barf! Barf!
Eric Smith
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over 14 years ago
Smarter error handling when user cancels the duplicate track dialog. DialogUtils now lets you specify title of input dialog (used to default to "Input").
Eric Smith
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over 14 years ago
Adding dist to repo for Big O
Marc Fiume
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over 14 years ago
Adding build to repo (for Orion :)
Marc Fiume
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over 14 years ago
Fixed some redraw issues switching from BAM to coverage and back.
Eric Smith
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over 14 years ago
Smarter detection of "No data in range" conditions in continuous tracks.
Eric Smith
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over 14 years ago
Tweaked drawing of top border of ruler where it is now exposed by reference-combo.
Eric Smith
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over 14 years ago
Tweaked appearance of "More..." link on news items.
Eric Smith
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over 14 years ago
News items can now have clickable links.
Eric Smith
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over 14 years ago
NullPointerException if you decide you just want the genome's cytoband and none of its auxiliary tracks.
Eric Smith
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over 14 years ago
UCSC plugin now sucks SQL plugin into its jar file. No longer has a dependency.
Eric Smith
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over 14 years ago
Missing values in .wib files weren't being handled properly.
Eric Smith
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over 14 years ago
At high resolutions points on continuous track should be drawn one base wide.
Eric Smith
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over 14 years ago
More work on gene lookups. Appearance of SNP tracks improved.
Eric Smith
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over 14 years ago
Fixed creation of name2 indices for UCSC gene files. Lookup by gene-name now available.
Eric Smith
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over 14 years ago
Beefed up ColumnMapping class. Sequence track starts initially checked in load genome dialog.
Eric Smith
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over 14 years ago
Changing genomes now opens and closes the associated auxiliary tracks.
Eric Smith
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over 14 years ago
Replaced "Interval Options" panel with height slider
Andrew Brook
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over 14 years ago
Remove "Jump to mate" and "Select pair" when mate position invalid
Andrew Brook
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over 14 years ago
Show message "no data in range" when appropriate
Andrew Brook
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over 14 years ago
Updated BAM popup with select pair, jump to start/end
Andrew Brook
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over 14 years ago
Duplicate track when loading before genome
Andrew Brook
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over 14 years ago
Duplicate frame key error
Andrew Brook
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over 14 years ago
Sorting was broken on ReferenceCombo.
Eric Smith
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over 14 years ago
Simply clicking on the RangeSelectionPanel should shift the display range without changing its length.
Eric Smith
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over 14 years ago
Skips over bogus "browser" lines inserted by USCS at start of some Wig files.
Eric Smith
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over 14 years ago
Better reporting of exceptions thrown during retrieveData.
Eric Smith
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over 14 years ago
Generic interval tracks were still being given a .savant extension despite being formatted as Tabix.
Eric Smith
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over 14 years ago
Cleanup of some unused listener/event classes. Continuous tracks now represent missing data as NaNs.
Eric Smith
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over 14 years ago
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