Xolotl Plasma-Surface Interactions

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Analyzed about 7 hours ago. based on code collected about 7 hours ago.

Commit Message	Contributor	Files Modified	Lines Added	Lines Removed	Code Location	Date
Sep 03, 2024 — Sep 03, 2025 Showing page 12 of 20 Search / Filter on:
Fixed the convergence problems that Sophie reported. It was because I accidently committed the cell breaks that I use for debugging. Next time I'll do this in a branch. ~JJB 20140206 9:45	jayjaybillings	More...				over 11 years ago
Fixed some problems related to the formation of the Jacobian for trap mutation. Also removed the dissociation modifier. ~JJB 20140204 17:18	jayjaybillings	More...				over 11 years ago
Fixed non-POD type issues for clang++. ~JJB 20140204 14:28	jayjaybillings	More...				over 11 years ago
Fixed PetscSolver output files formating and cleaned it a little. SB 20140204	sblondel	More...				over 11 years ago
Fixed a bug in the PSICluster where the wrong dissociating cluster was used to calculate the reaction coefficient. ~JJB 20140204 9:58	jayjaybillings	More...				over 11 years ago
Fixed a bug that Barry found in the creation of the Jacobian. Will finish testing it out over beer at home. Also fixed a glaring bug in the computation of the dissociation constant. ~JJB 20140203 18:18	jayjaybillings	More...				over 11 years ago
Committing minor changes to the Performance Interface Class Diagram. CLJ 20140203	cjernigan	More...				over 11 years ago
Committing performance classes and test classes. These are only stubs and are not yet implemented. ~JJB & CLJ 20140203 12:30	jayjaybillings	More...				over 11 years ago
Made a comment at a place where the behavior looks strange for the dissociation constant. ~JJB 20140202 21:48	jayjaybillings	More...				over 11 years ago
Completely updated the way that reactant ids work, how reaction radii are managed and the way that binding energies are indexed. I also fixed a couple of bugs related to indexing in partial derivative computations and fixed an erroneous reaction radii calculation for the HeVCluster. Updated tests as needed. ~JJB 20140131 16:57	jayjaybillings	More...				over 11 years ago
Corrected and updated the performance models. CLJ 20140131	cjernigan	More...				over 11 years ago
Updated Xolotl so that clusters cache much more information instead of trying to compute it which greatly accelerates the time to compute partial derivatives and the flux. Compound clusters now cache their nearest neighbors one size smaller as well as the single-species clusters into which they dissociate. Compositions are now returned by reference and managed by Reactant and filled in the constructor. Cleaned up a lot of crap that was hanging around from the summer. ~JJB 20140130 18:26	jayjaybillings	More...				over 11 years ago
Updated performance model to represent the HardwareCounter quantities as an enumeration. CLJ 20140130	cjernigan	More...				over 11 years ago
Uniformization of the tests, improvement of HeClusterTester, interstitialClusterTester, and VClusterTester. The maxClusterSize of SimpleReactionNetwork is now a parameter set to 10 by default. Update of ReactantTester with the current methods. SB 20140129	sblondel	More...				over 11 years ago
Python code using Smooth and Least Squares Bivariate Splines to fit the binding energy of Helium as a function of Helium and Vacancy cluster sizes. CLJ 20140129	cjernigan	More...				over 11 years ago
Python code fitting the scaled binding energy of Helium as a function of Helium and Vacancy cluster sizes using bsplines. CLJ 20140129	cjernigan	More...				over 11 years ago
Updated performance model to represent the HardwareCounter quantities as a vector of integers. CLJ 20140129	cjernigan	More...				over 11 years ago
Folder containing UQ codes. CLJ 20140128	cjernigan	More...				over 11 years ago
Made some changes to the HeI tests and cleaned up some old code in the SimpleReactionNetwork. ~JJB 20140128 15:15	jayjaybillings	More...				over 11 years ago
Fixed most of the tests that needed to. Cleaned HeVCluster from old stuff, cleaned and updated HeInterstitialCluster. Changed one comment in PSICluster.	sblondel	More...				over 11 years ago
Committing the initial model for the Performance tests. CLJ 20140124	cjernigan	More...				over 11 years ago
Fixed an I/O line in PetscSolver.cpp. ~JJB 20140121 17:05	jayjaybillings	More...				over 11 years ago
Fixed function label for solve. ~JJB 20140121 16:36	jayjaybillings	More...				over 11 years ago
Fixed function label. ~JJB 20140121 16:32	jayjaybillings	More...				over 11 years ago
Fixed PetscNew call to be consistent with master version of PETSc. ~JJB 20140121 16:14	jayjaybillings	More...				over 11 years ago
Correctly set dfill in the block fill call. ~JJB 20140115 13:42	jayjaybillings	More...				over 11 years ago
Minor changes to the MPI stuff. ~JJB 20140115 11:36	jayjaybillings	More...				over 11 years ago
Committing a linker fix for Macs. ~JJB 20140114 14:59	jayjaybillings	More...				over 11 years ago
Modified the build system so that testing is disabled if Boost is not found. Cleaned up some of the print statements. ~JJB 20140114 12:04	jayjaybillings	More...				over 11 years ago
Fixed one more spamming comment. ~JJB 20140113 15:20	jayjaybillings	More...				over 11 years ago

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