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Analyzed about 22 hours ago. based on code collected about 22 hours ago.

Commit Message	Contributor	Files Modified	Lines Added	Lines Removed	Code Location	Date
Aug 18, 2024 — Aug 18, 2025 Showing page 3 of 20 Search / Filter on:
TFBS upstream	DannyArends	More...				over 5 years ago
QTL mapping gigamuga	DannyArends	More...				over 5 years ago
minor fix	DannyArends	More...				over 5 years ago
preprocessing of gigamuga	DannyArends	More...				over 5 years ago
Calling SNPs per chromosome	DannyArends	More...				almost 6 years ago
Ignore .gz files	DannyArends	More...				almost 6 years ago
Work on BFMI origin	DannyArends	More...				almost 6 years ago
Minor changes to the differentilly expressed genes in pig	DannyArends	More...				almost 6 years ago
Minor changes to the genome digestion for Hi-C	DannyArends	More...				almost 6 years ago
Minor updates, more comments, using byKey	DannyArends	More...				almost 6 years ago
Updates to fragment assign, new D script for genome binning, updated the R post analysis	DannyArends	More...				almost 6 years ago
Header, comments, etc	DannyArends	More...				almost 6 years ago
First output plots	DannyArends	More...				almost 6 years ago
Minor code cleaning	DannyArends	More...				almost 6 years ago
Minor code updates, using appender to avoid some re-allocations	DannyArends	More...				almost 6 years ago
Minor code cleaning	DannyArends	More...				almost 6 years ago
Bug fix for gzip problem, and using Hashmap compared to buildin AA[string]	DannyArends	More...				almost 6 years ago
Minor bug when chromosome is not 1..24	DannyArends	More...				almost 6 years ago
Hi-C Fragment assignment of iteratively mapped reads	DannyArends	More...				almost 6 years ago
Finalizing the iterative read mapping procedure with BWA	DannyArends	More...				almost 6 years ago
Minor updates to the Hi-C code	DannyArends	More...				almost 6 years ago
Digest a genome in-silico (Hi-C) using D	DannyArends	More...				almost 6 years ago
Updated to the down stream RNA-Seq on pigs treated with ef and efuv versus control	DannyArends	More...				almost 6 years ago
updates that I forgot to push before the summer holiday 2019	DannyArends	More...				about 6 years ago
Updates to the sequencing pipeline 100x coverage BFMI 860-12	DannyArends	More...				over 6 years ago
Updated analysis Salma	DannyArends	More...				over 6 years ago
Simulation script eQTL on RNA-Seq	DannyArends	More...				over 6 years ago
Minor updates to the pipeline + prep script for required software	DannyArends	More...				over 6 years ago
Circular dendrogram, colors and merged with Peterson horses	DannyArends	More...				over 6 years ago
GOslim and clustering of horses	DannyArends	More...				over 6 years ago

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