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Analyzed 1 day ago. based on code collected 1 day ago.

Commit Message	Contributor	Files Modified	Lines Added	Lines Removed	Code Location	Date
Sep 18, 2024 — Sep 18, 2025 Showing page 6 of 20 Search / Filter on:
Updates to the goat analysis, making sure I have all the recent code	DannyArends	More...				over 8 years ago
fgsea on pigs	DannyArends	More...				over 8 years ago
Code I used to merge the different datasets 50k 3 different encodings, and DNA Seq). The UniGiesen file is the old analysis file, code is split across the 6 files 1..6 to have more structure	DannyArends	More...				over 8 years ago
Adjusted the pipeline to resequence the DIFE mouse DNA-Seq samples	DannyArends	More...				over 8 years ago
Updating the GN2 permutation routine (no more permutation)	DannyArends	More...				over 8 years ago
Updates to Ramona's figures	DannyArends	More...				over 8 years ago
Example script for Jinsong	DannyArends	More...				over 8 years ago
Working on the BFMI S1 versus S2 looking for genomic regions between the two	DannyArends	More...				over 8 years ago
Minor edits to Jasper his figures	DannyArends	More...				over 8 years ago
Updates to the goat (Ibex) analysis	DannyArends	More...				over 8 years ago
Adding some information about SNP calling in Chicken DNA-Seq data	DannyArends	More...				over 8 years ago
Updates to the analysis of Sudanese goats	DannyArends	More...				over 8 years ago
Investigate QTL scores in the ATB regions	DannyArends	More...				almost 9 years ago
Writing out as plink, fixing the ordering of the chromosomes in the map file	DannyArends	More...				almost 9 years ago
Writing out data to perform STRUCTURE analysis on the Ibex data	DannyArends	More...				almost 9 years ago
Updates to the ibex analysis	DannyArends	More...				almost 9 years ago
Ibex Goat by SNP chip analysis, PCA and more figures	DannyArends	More...				almost 9 years ago
Goat SNP, new paths for windows	DannyArends	More...				almost 9 years ago
ATB code, new paths for windows	DannyArends	More...				almost 9 years ago
Fixing a minor display issue in the plot	DannyArends	More...				almost 9 years ago
Ibex Goat by SNP chip analysis, updated with predicted positions	DannyArends	More...				almost 9 years ago
Initial analysis of Ibex goats from Sudan	DannyArends	More...				almost 9 years ago
More permutations for a more accurate pvalue	DannyArends	More...				almost 9 years ago
Updates to the megamuga analysis, using only significant QTL in the permutation	DannyArends	More...				almost 9 years ago
Updates to the analysis of the Horse data	DannyArends	More...				almost 9 years ago
Adding some conclusions to the bottom of the script	DannyArends	More...				almost 9 years ago
Adding plots to show 4 major QTL showing no sex specific effect	DannyArends	More...				almost 9 years ago
Removed unused libraries	DannyArends	More...				almost 9 years ago
Minor updates to the script, more comments	DannyArends	More...				almost 9 years ago
Minor updates to the script, more comments	DannyArends	More...				almost 9 years ago

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