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Moderate Activity
Commits
: Listings
Analyzed
about 17 hours
ago. based on code collected
about 17 hours
ago.
Aug 24, 2024 — Aug 24, 2025
Showing page 86 of 114
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Code Location
Date
Fix bam_write1() error handling
John Marshall
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over 11 years ago
Fix bgzf_write() and bgzf_flush_try() error handling
John Marshall
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over 11 years ago
Merge branch 'develop' into bcftools+calling
Petr Danecek
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over 11 years ago
Add hts_set_threads() file I/O threading API
John Marshall
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over 11 years ago
vcf_parse: Detect missing INFO values in vectors
Petr Danecek
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over 11 years ago
Merge CRAM indexing bug fixes (PR #85)
John Marshall
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over 11 years ago
bcf_write: sanity check the number of samples, resolves #55
Petr Danecek
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over 11 years ago
Return "" from bam_flag2str(0) rather than NULL
John Marshall
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over 11 years ago
Check sam_open() and sam_close() return values
John Marshall
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over 11 years ago
Silence -Wstrict-prototypes warning
John Marshall
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over 11 years ago
Merge branch 'bcftools+calling' into develop
John Marshall
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over 11 years ago
bcf1_sync: Update rlen for new records as well
Petr Danecek
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over 11 years ago
Exit statuses are non-negative
John Marshall
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over 11 years ago
Fix bgzip and tabix dependencies and link commands
John Marshall
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over 11 years ago
Don't call freeaddrinfo() when getaddrinfo() fails
John Marshall
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over 11 years ago
synced_reader: Regions operate on two as well as three columns again
Petr Danecek
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over 11 years ago
bcf_subset: Reset n_fmt fields when all samples are dropped
Petr Danecek
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over 11 years ago
Merge bgzip.c and tabix.c/.1 history from github.com/samtools/tabix
John Marshall
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over 11 years ago
Better fix for container memory leak.
James Bonfield
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over 11 years ago
Revert one of the previous memory leaks as it breaks multi-threading. I need to find a more suitable way to solve this. The memory leak is back, but it's tiny; essentially leaking the last (empty) container.
James Bonfield
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over 11 years ago
Fixed two small memory leaks.
James Bonfield
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over 11 years ago
.gitignore tabix and bgzip
Petr Danecek
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over 11 years ago
Added bgzip and tabix
Petr Danecek
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over 11 years ago
Bug fix to CRAM indexing and index usage.
James Bonfield
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over 11 years ago
bcf_remove_alleles to work with BCF output
Petr Danecek
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over 11 years ago
Fixed BCF output after bcf1_sync_alleles, simplified
Petr Danecek
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over 11 years ago
Silence -Wstrict-prototypes warnings
John Marshall
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over 11 years ago
bcf_remove_alleles: Fix indexing range for Number=A alleles
Petr Danecek
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over 11 years ago
Improve hts_idx_get_stat to work for more file types
Martin O. Pollard
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over 11 years ago
bcf_sr_seek to seek to start with seq=NULL
Petr Danecek
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over 11 years ago
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