1
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Moderate Activity

Commits : Listings

Analyzed about 17 hours ago. based on code collected about 17 hours ago.
Aug 24, 2024 — Aug 24, 2025
Commit Message Contributor Files Modified Lines Added Lines Removed Code Location Date
Fix bam_write1() error handling More... over 11 years ago
Fix bgzf_write() and bgzf_flush_try() error handling More... over 11 years ago
Merge branch 'develop' into bcftools+calling More... over 11 years ago
Add hts_set_threads() file I/O threading API More... over 11 years ago
vcf_parse: Detect missing INFO values in vectors More... over 11 years ago
Merge CRAM indexing bug fixes (PR #85) More... over 11 years ago
bcf_write: sanity check the number of samples, resolves #55 More... over 11 years ago
Return "" from bam_flag2str(0) rather than NULL More... over 11 years ago
Check sam_open() and sam_close() return values More... over 11 years ago
Silence -Wstrict-prototypes warning More... over 11 years ago
Merge branch 'bcftools+calling' into develop More... over 11 years ago
bcf1_sync: Update rlen for new records as well More... over 11 years ago
Exit statuses are non-negative More... over 11 years ago
Fix bgzip and tabix dependencies and link commands More... over 11 years ago
Don't call freeaddrinfo() when getaddrinfo() fails More... over 11 years ago
synced_reader: Regions operate on two as well as three columns again More... over 11 years ago
bcf_subset: Reset n_fmt fields when all samples are dropped More... over 11 years ago
Merge bgzip.c and tabix.c/.1 history from github.com/samtools/tabix More... over 11 years ago
Better fix for container memory leak. More... over 11 years ago
Revert one of the previous memory leaks as it breaks multi-threading. I need to find a more suitable way to solve this. The memory leak is back, but it's tiny; essentially leaking the last (empty) container. More... over 11 years ago
Fixed two small memory leaks. More... over 11 years ago
.gitignore tabix and bgzip More... over 11 years ago
Added bgzip and tabix More... over 11 years ago
Bug fix to CRAM indexing and index usage. More... over 11 years ago
bcf_remove_alleles to work with BCF output More... over 11 years ago
Fixed BCF output after bcf1_sync_alleles, simplified More... over 11 years ago
Silence -Wstrict-prototypes warnings More... over 11 years ago
bcf_remove_alleles: Fix indexing range for Number=A alleles More... over 11 years ago
Improve hts_idx_get_stat to work for more file types More... over 11 years ago
bcf_sr_seek to seek to start with seq=NULL More... over 11 years ago