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Analyzed about 8 hours ago. based on code collected about 8 hours ago.

Commit Message	Contributor	Files Modified	Lines Added	Lines Removed	Code Location	Date
Aug 20, 2024 — Aug 20, 2025 Showing page 93 of 114 Search / Filter on:
Fixed a couple complaints from clang.	James Bonfield	More...				almost 12 years ago
Added prototype for cram_set_header()	James Bonfield	More...				almost 12 years ago
Samtools. The test harness worked, but the samtools interface needed an additional cram_set_header function as we don't pass this over when opening the new cram file. (Try#2 - previous commit accidentally rolled back an upstream change from 2 hours before.)	James Bonfield	More...				almost 12 years ago
Merge branch 'develop' of https://github.com/samtools/htslib into develop	James Bonfield	More...				almost 12 years ago
Reverted a fix of "chr:pos-pos" index queries, the original version now works.	Petr Danecek	More...				almost 12 years ago
Fixed a variety of multi-threading data races, detected through 1000 repeated runs of the same command at approximately the 2% failure level on unsorted data only.	James Bonfield	More...				almost 12 years ago
Merge branch 'develop' into bcftools+calling	Petr Danecek	More...				almost 12 years ago
The file type not necessary any more when opening synced reader	Petr Danecek	More...				almost 12 years ago
bcf_sr_open_reader(): Auto-detect input file format	John Marshall	More...				almost 12 years ago
Format detection: non-compressed binaries; is_compressed setting	John Marshall	More...				almost 12 years ago
hts_open(fname, "r") now works in both cases; no need for "rb"	John Marshall	More...				almost 12 years ago
test.pl: fail if any tests fail	John Marshall	More...				almost 12 years ago
Fix tbx_itr_next() when given a textual (is_kstream) htsFile	John Marshall	More...				almost 12 years ago
Limit input hFILE buffers to 32K [temporary hack version]	John Marshall	More...				almost 12 years ago
Require lowercase [rw] mode letters in bgzf_open() etc	John Marshall	More...				almost 12 years ago
Tab, newline, etc are not control characters	John Marshall	More...				almost 12 years ago
Merge branch 'io' into develop	John Marshall	More...				almost 12 years ago
hts_open(fname, "r") detects format by peeking at the input	John Marshall	More...				almost 12 years ago
vcf: Print a comprehensible error message if unsupported version of BCF is encountered	Petr Danecek	More...				almost 12 years ago
Use hFILE underneath cram_fd, and add cram_dopen()	John Marshall	More...				almost 12 years ago
Move cram_seek() from cram_index.c to cram_io.c	John Marshall	More...				almost 12 years ago
Merge branch 'bcftools+calling' into develop	Petr Danecek	More...				almost 12 years ago
Fixed errors in copyright due to pasting the MRC one and forgetting to change the organisation name. Oops!	James Bonfield	More...				almost 12 years ago
Added copyright notices.	James Bonfield	More...				almost 12 years ago
vcf: New bcf_hdr_printf() call	Petr Danecek	More...				almost 12 years ago
Merge pull request #27 from jkbonfield/develop	John Marshall	More...				almost 12 years ago
Fixed CRAM to code with the 0x800 supplementary flag.	James Bonfield	More...				almost 12 years ago
Return bytes >= 0x80 from hgetc() correctly	John Marshall	More...				almost 12 years ago
Get rid of %ld compilaiton warnings	Petr Danecek	More...				almost 12 years ago
Add BAM_FSUPPLEMENTARY flag bit	John Marshall	More...				almost 12 years ago

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