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Commits : Listings

Analyzed about 13 hours ago. based on code collected about 13 hours ago.
Jul 18, 2024 — Jul 18, 2025
Commit Message Contributor Files Modified Lines Added Lines Removed Code Location Date
add algorithms.synteny.rebuild()
tanghaibao
as Haibao Tang
More... almost 13 years ago
fix formats.base.subset(). (minor) More... almost 13 years ago
fix some options and formats in formats.base.subset(). (minor) More... almost 13 years ago
add formats.base.subset() to subset rows in a pivot file according to intersection with additional files More... almost 13 years ago
fix line continuation formatting in graphics.dotplot
tanghaibao
as Haibao Tang
More... almost 13 years ago
add options --genomenames and --nmax to graphics.dotplot More... almost 13 years ago
fix accn in GffLine.bedline
tanghaibao
as Haibao Tang
More... almost 13 years ago
change option --until to --sep in format.fasta.format()
tanghaibao
as Haibao Tang
More... almost 13 years ago
add utils.counter for py2.6 compat
tanghaibao
as Haibao Tang
More... almost 13 years ago
docstring update in algorithms.synteny (minor) More... about 13 years ago
minor fix in algorithms.synteny.scan option to be more explicit More... about 13 years ago
minor alternative keyword addition in algorithms.synteny.scan More... about 13 years ago
minor fix More... about 13 years ago
Merge branch 'master' of git://github.com/tanghaibao/jcvi More... about 13 years ago
fix option --genomesize in assembly.simulate
tanghaibao
as Haibao Tang
More... about 13 years ago
use --qbed and --sbed in algorithms.quota() and algorithms.synteny.screen()
tanghaibao
as Haibao Tang
More... about 13 years ago
modify multi-threading in apps.blastplus More... about 13 years ago
minor fix in apps.blastplus More... about 13 years ago
Merge branch 'master' of https://github.com/tanghaibao/jcvi More... about 13 years ago
fix multi-threading option in apps.blastplus More... about 13 years ago
use formats.fasta.translate() in apps.ks
tanghaibao
as Haibao Tang
More... about 13 years ago
bug fix More... about 13 years ago
add apps.blastplus as wrapper of blast+ More... about 13 years ago
Jingping http address in README
tanghaibao
as Haibao Tang
More... about 13 years ago
remove pyc files; add Jingping to README
tanghaibao
as Haibao Tang
More... about 13 years ago
added option to run makeblastdb for prot, but default to nucl. More... about 13 years ago
Merge branch 'master' of https://github.com/tanghaibao/jcvi More... about 13 years ago
add legend placement in apps.ks
tanghaibao
as Haibao Tang
More... about 13 years ago
docstring update for formats.fastq.shuffle()
tanghaibao
as Haibao Tang
More... about 13 years ago
refactor apps.ks
tanghaibao
as Haibao Tang
More... about 13 years ago