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Analyzed about 6 hours ago. based on code collected about 7 hours ago.

Commit Message	Contributor	Files Modified	Lines Added	Lines Removed	Code Location	Date
Jun 11, 2023 — Jun 11, 2024 Showing page 39 of 50 Search / Filter on:
Allow analysis pipeline to be run with an input YAML configuration file	Brad Chapman	More...				over 13 years ago
Merge branch 'master' of github.com:chapmanb/bcbb	Brad Chapman	More...				over 13 years ago
Automated analysis of variant effects with snpEff	Brad Chapman	More...				over 13 years ago
Generalize sequence retrieval for transcripts of interest	Brad Chapman	More...				over 13 years ago
Upload readjustment to work with barcoded samples	Brad Chapman	More...				over 13 years ago
Additional summary metrics for assessing hybrid selection; latest GATK genotyper support	Brad Chapman	More...				over 13 years ago
Statistics and uploading modified for world of barcoded samples	Brad Chapman	More...				over 13 years ago
Summary CSV file preparation for barcoded samples	Brad Chapman	More...				over 13 years ago
Genotyping updates for latest GATK	Brad Chapman	More...				over 13 years ago
Update data table to match latest Galaxy changes	Brad Chapman	More...				over 13 years ago
Support for multiplexed output samples in processing; revisions for latest GATK (1.0.4705)	Brad Chapman	More...				over 13 years ago
Update cloudbiolinux page to link to JCVI/NEBC	Brad Chapman	More...				over 13 years ago
Merge branch 'master' of git://github.com/chapmanb/bcbb	Roman Valls Guimera	More...				over 13 years ago
Separating fastq and qseq generation logic	Roman Valls Guimera	More...				over 13 years ago
Generate fastq from qseq with Illumina barcodes	Brad Chapman	More...				over 13 years ago
Updated one of the scripts pre-processing (conversion) role	Roman Valls Guimerà	More...				over 13 years ago
Switch back to scp; rsync is creating additional directories	Brad Chapman	More...				over 13 years ago
Switch back to scp; rsync is creating additional directories	Brad Chapman	More...				over 13 years ago
Do alignments only when mismatches are allowed	Brad Chapman	More...				over 13 years ago
Do alignments only when mismatches are allowed	Brad Chapman	More...				over 13 years ago
eliminate gitignores	Roman Valls Guimera	More...				over 13 years ago
Added conditional flags for qseq & fastq	Roman Valls Guimerà	More...				over 13 years ago
Added conditional flags for qseq & fastq	Roman Valls Guimerà	More...				over 13 years ago
Merge branch 'master' of git://github.com/chapmanb/bcbb	Roman Valls Guimerà	More...				over 13 years ago
Merge branch 'master' of github.com:chapmanb/bcbb	Brad Chapman	More...				over 13 years ago
Update distblast ec2 instructions and automated install	Brad Chapman	More...				over 13 years ago
Update distblast ec2 instructions and automated install	Brad Chapman	More...				over 13 years ago
Updated script for bootstrapping R	Brad Chapman	More...				over 13 years ago
Updated script for bootstrapping R	Brad Chapman	More...				over 13 years ago
Update C elegans to latest Ensembl release	Brad Chapman	More...				over 13 years ago

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