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Commits : Listings

Analyzed about 9 hours ago. based on code collected about 13 hours ago.
Apr 30, 2023 — Apr 30, 2024
Commit Message Contributor Files Modified Lines Added Lines Removed Code Location Date
Provide combining information based on paralogs or chromosomal location.
Brad Chapman
More... over 15 years ago
Also keep ensembl refs
Brad Chapman
More... over 15 years ago
Add visualization classification example. Updates to analysis based on interpro family domains.
Brad Chapman
More... over 15 years ago
Renamed file to be correct.
Brad Chapman
More... over 15 years ago
Cluster interpro proteins based on text descriptions; uses Zemanta
Brad Chapman
More... over 15 years ago
Add STRING data to domain retrieval. Analyze results with k-means clustering.
Brad Chapman
More... over 15 years ago
Merge branch 'master' of [email protected]:chapmanb/bcbb Conflicts: rest_apis/interpro_domain_summary.py
Brad Chapman
More... over 15 years ago
Add parsing of database refs and functional descriptions.
Brad Chapman
More... over 15 years ago
Manage UniRef clustering of 90%+ proteins.
Brad Chapman
More... over 15 years ago
Provide an interface to download and retrieve data from InterPro and Uniprot.
Brad Chapman
More... over 15 years ago
Generalize the ensembl parsing script.
Brad Chapman
More... over 15 years ago
Finalized ensembl retrieval code for initial scan.
Brad Chapman
More... over 15 years ago
Initial code to provide a simple rest interface for ensembl data.
Brad Chapman
More... over 15 years ago
Finalized initial version
Brad Chapman
More... over 15 years ago
- Finalized initial mapping of BioSQL to ontologies - Rearranged files to make sense
Brad Chapman
More... over 15 years ago
Added updated sparta file.
Brad Chapman
More... over 15 years ago
More work on the mappings
Brad Chapman
More... over 15 years ago
Initial submission of biosql ontology thoughts and files.
Brad Chapman
More... over 15 years ago