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Project Summary

Cufflinks assembles transcripts, estimates their abundances, and tests for differential expression and regulation in RNA-Seq samples. It accepts aligned RNA-Seq reads and assembles the alignments into a parsimonious set of transcripts. Cufflinks then estimates the relative abundances of these transcripts based on how many reads support each one, taking into account biases in library preparation protocols.

Tags

bioinformatics c++ python rna_seq sequencing transcripts

In a Nutshell, cufflinks...

Boost Software License 1.0
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Project Security

Vulnerabilities per Version ( last 10 releases )

There are no reported vulnerabilities

Project Vulnerability Report

Security Confidence Index

Poor security track-record
Favorable security track-record

Vulnerability Exposure Index

Many reported vulnerabilities
Few reported vulnerabilities

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About Project Security

Languages

C++
74%
C
13%
HTML
5%
8 Other
8%

30 Day Summary

Jun 12 2022 — Jul 12 2022

12 Month Summary

Jul 12 2021 — Jul 12 2022