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Analyzed about 2 hours ago. based on code collected about 2 hours ago.

Commit Message	Contributor	Files Modified	Lines Added	Lines Removed	Code Location	Date
Aug 01, 2024 — Aug 01, 2025 Showing page 106 of 114 Search / Filter on:
Use matplotlib and pdflatex to create summary slides	Petr Danecek	More...				about 13 years ago
Calculate AC,AN on fly if not in INFO; allow calling bcf_unpack() repeatedly without redoing the work; plot graphs using matplotlib; bugfixes	Petr Danecek	More...				about 13 years ago
Calculate AC,AN on fly if not in INFO; allow calling bcf_unpack() repeatedly without redoing the work; plot graphs using matplotlib; bugfixes	Petr Danecek	More...				about 13 years ago
Merge branch 'master' of github.com:pd3/htslib	Petr Danecek	More...				about 13 years ago
First plot-vcfcheck skeleton	Petr Danecek	More...				about 13 years ago
Removed hacky work around, tabix seems to be fully working now	Petr Danecek	More...				about 13 years ago
Invalid read fix in hts_itr_query; Unsafe loop limits fix in vcf_parse1	Petr Danecek	More...				about 13 years ago
Synced reader can collapse sites by variant type; new API call set_variant_types	Petr Danecek	More...				about 13 years ago
Collect Ts/Tv by AF	Petr Danecek	More...				about 13 years ago
Functional implementation of synced reader including allele checking	Petr Danecek	More...				about 13 years ago
Fill sequence dictionary from tabix index if contigs not present in VCF header. Synced reader basically working. (No alleles detection yet.)	Petr Danecek	More...				about 13 years ago
Experimental implementation of vcfcheck (non-functional)	Petr Danecek	More...				about 13 years ago
API to test if a record is a SNP	Heng Li	More...				about 13 years ago
bugfix: vcfview -G failing due to recent changes	Heng Li	More...				about 13 years ago
compatible with tabix index	Heng Li	More...				about 13 years ago
vcf<->bcf is pretty mature now	Heng Li	More...				about 13 years ago
better help	Heng Li	More...				about 13 years ago
abreak is working!	Heng Li	More...				about 13 years ago
migrate sam2break.d to htslib	Heng Li	More...				about 13 years ago
added a little doc	Heng Li	More...				about 13 years ago
changed function names	Heng Li	More...				about 13 years ago
make bcf_unpack() more flexible	Heng Li	More...				about 13 years ago
a little bit code simplification	Heng Li	More...				about 13 years ago
bugfix: a typo	Heng Li	More...				about 13 years ago
removed old vcf_format1() code	Heng Li	More...				about 13 years ago
generating vcf from bcf_dec_t; to remove old code	Heng Li	More...				about 13 years ago
Merge pull request #2 from arq5x/master	Heng Li	More...				about 13 years ago
declare bcf_unpack in the header	Aaron Quinlan	More...				about 13 years ago
nothing	Heng Li	More...				about 13 years ago
unpack bcf1_t; NOT WORKING yet	Heng Li	More...				about 13 years ago

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