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Moderate Activity
Commits
: Listings
Analyzed
about 6 hours
ago. based on code collected
about 6 hours
ago.
Jul 31, 2024 — Jul 31, 2025
Showing page 103 of 114
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plot-vcfcheck: Escape all underscores summary.tex
Petr Danecek
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over 12 years ago
plot-vcfcheck: Prevent division by zero in FS merging
Petr Danecek
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over 12 years ago
r200: the previous is not good enough
Heng Li
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over 12 years ago
r199: reduce one conflict when merged with master
Heng Li
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over 12 years ago
r198: tag version
Heng Li
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over 12 years ago
added bam2bed
Heng Li
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over 12 years ago
merge r199 changes; part 3
Heng Li
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over 12 years ago
merge r199 changes; part 2
Heng Li
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over 12 years ago
merge r199 changes; part 1
Heng Li
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over 12 years ago
Merge branch 'master' of github.com:samtools/htslib
Heng Li
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over 12 years ago
vcfcheck: --debug outputs to stdout rather than stderr and the output parsable
Petr Danecek
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over 12 years ago
vcfcheck: New -t option
Petr Danecek
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over 12 years ago
htslib/vcf.c: free unused records, fixed a small memory leak
Petr Danecek
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over 12 years ago
plot-vcfcheck: zoomed y-range for ts/tv by sample graph
Petr Danecek
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over 12 years ago
htslib/vcf.c: Set length of on-fly added chromosomes to max signed int; Removed deprecated header parsing code.
Petr Danecek
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over 12 years ago
Merge remote branch 'remotes/pd3master/master' into develop
Petr Danecek
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over 12 years ago
plot-vcfcheck: Fix in merging per-sample average depth - average, not sum
Petr Danecek
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over 12 years ago
plot-vcfcheck: Added missing legend into SNP/indel counts by AF graphs
Petr Danecek
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over 12 years ago
vcf.c: strip newline from the last sample in BCFs
Petr Danecek
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over 12 years ago
plot-vcfcheck: new -s switch; several new graphs and table values
Petr Danecek
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over 12 years ago
vcfcheck: singletons by sample and multiallelic SNPs stats
Petr Danecek
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over 12 years ago
htscmd: fall back to default name when named non-standardly
Petr Danecek
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over 12 years ago
plot-vcfcheck: -T option to set PDF title; minor improvements in various plots
Petr Danecek
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over 12 years ago
Fix: do not drop first record with both -B and -h
Petr Danecek
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over 12 years ago
plot-vcfcheck: removed forgotten debugging comments; merge of allelic r2 column in GCsAF
Petr Danecek
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over 12 years ago
Merge remote branch 'remotes/mp15master/master' into develop
Petr Danecek
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over 12 years ago
plot-vcfcheck: fixed forgotten .pdf extension string
Petr Danecek
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over 12 years ago
vcfcheck: New stats and graph, allelic r2 by AF
Petr Danecek
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over 12 years ago
vcf_parse1: error recovery on missing FILTER/INFO/FORMAT tag definitions
Petr Danecek
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over 12 years ago
plot-vcfcheck: fixex merging of per-sample stats
Petr Danecek
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over 12 years ago
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