H

htslib

Settings | Report Duplicate

1

I Use This!

Moderate Activity

Commits : Listings

Analyzed about 9 hours ago. based on code collected about 9 hours ago.

Commit Message	Contributor	Files Modified	Lines Added	Lines Removed	Code Location	Date
Aug 16, 2024 — Aug 16, 2025 Showing page 105 of 114 Search / Filter on:
Fix signed return going into unsigned variable	Martin Pollard	More...				almost 13 years ago
Merge pull request #1 from samtools/master	mp15	More...				almost 13 years ago
Merge remote branch 'mp15/misc_improve'	Petr Danecek	More...				almost 13 years ago
Merge remote branch 'main/master'	Petr Danecek	More...				almost 13 years ago
Synced reader and hence vcf*tools now work also with bcf2	Petr Danecek	More...				almost 13 years ago
Fixed typo, check i-th ALT instead of 1st in set_variant_types	Petr Danecek	More...				almost 13 years ago
Fixed typo, open with w instead of r	Petr Danecek	More...				almost 13 years ago
Use off_t and lseek rather than the 64 alternatives as this is more portable.	Martin Pollard	More...				almost 13 years ago
Fix function prototypes for knetfile and bgzf to match system read and write.	Martin Pollard	More...				almost 13 years ago
Depth distribution stats	Petr Danecek	More...				almost 13 years ago
r199: support retrieving reads w/o coordinates	Heng Li	More...				almost 13 years ago
Always check INFO/AC,AN for by AF; TsTv by Qual stats	Petr Danecek	More...				almost 13 years ago
Fix in calc_ac for missing GTs; Number of MNPs and other events in the summary table	Petr Danecek	More...				almost 13 years ago
r198: changed the BCF2 magic to BCF\2\1	Heng Li	More...				almost 13 years ago
New option --split-by-ID for known vs novel stats	Petr Danecek	More...				almost 13 years ago
Changed NRD output	Petr Danecek	More...				about 13 years ago
Sample list from file or command line; Handle missing GTs in calc_ac and init_iaf; Documented plotting	Petr Danecek	More...				about 13 years ago
Fix in per sample stats; Minor cosmetic improvements of plots	Petr Danecek	More...				about 13 years ago
Another vcfcheck stats: NRD by sample	Petr Danecek	More...				about 13 years ago
More vcfcheck stats: Ts/Tv and nHets by sample	Petr Danecek	More...				about 13 years ago
Documented the synced reader; More stats for vcfcheck: genotype concordance; Bugfixes	Petr Danecek	More...				about 13 years ago
Merged github.com:pd3/htslib	Petr Danecek	More...				about 13 years ago
More stats: frameshifts ratio; bug fixes	Petr Danecek	More...				about 13 years ago
clarify that BCF2 is BGZF'd and little endian	Heng Li	More...				about 13 years ago
clarify the BCF2 document	Heng Li	More...				about 13 years ago
vcf: add "PASS" before anything else	Heng Li	More...				about 13 years ago
create_pdf: Switched from slides class to memoir	Petr Danecek	More...				about 13 years ago
bugfix: invalid memory access (fixed by petr)	Heng Li	More...				about 13 years ago
added BAM aux functions and bam2bed	Heng Li	More...				about 13 years ago
More stats: SNP and indel counts by AC	Petr Danecek	More...				about 13 years ago

←
1
2
…
101
102
103
104
105
106
107
108
109
…
113
114
→