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I Use This!
Moderate Activity

Commits : Listings

Analyzed about 1 hour ago. based on code collected about 1 hour ago.
Aug 31, 2024 — Aug 31, 2025
Commit Message Contributor Files Modified Lines Added Lines Removed Code Location Date
Merge pull request #2 from arq5x/master More... about 13 years ago
declare bcf_unpack in the header More... about 13 years ago
nothing More... about 13 years ago
unpack bcf1_t; NOT WORKING yet More... about 13 years ago
declare bcf_fmt_sized_array() in the header More... about 13 years ago
halve HTS_MIN_MARKER_DIST; updated doc More... about 13 years ago
handle unmapped aln in SAM More... about 13 years ago
bugfix: update_loff() run twice More... about 13 years ago
using -O2 More... about 13 years ago
bugfix More... about 13 years ago
bugfix in the new index; containing dbg code More... about 13 years ago
a bit code cleanup More... about 13 years ago
bugfix: bin 0 is not sorted More... about 13 years ago
BAM indexing works again on a toy example More... about 13 years ago
new indexing algo/fmt; NOT working yet More... about 13 years ago
bugfix: missing values are not filled sometimes More... about 13 years ago
smart sample list More... about 13 years ago
allow to drop all individual information More... about 13 years ago
output a subset of samples More... about 13 years ago
change the meaning of l_shared (in line with GATK) More... about 13 years ago
bugfix: wrong integer packing More... about 13 years ago
more flexible about the '\n' and '\0' in hdr More... about 13 years ago
added a brief README More... about 13 years ago
added command-line help More... about 13 years ago
fixed a few g++ warnings More... about 13 years ago
minor change to the index description More... about 13 years ago
format of the new index More... about 13 years ago
added an example for tabix More... about 13 years ago
tabix apparently works, at least on toy examples More... about 13 years ago
CLI for tabix More... about 13 years ago