0
I Use This!
Low Activity

Commits : Listings

Analyzed about 10 hours ago. based on code collected about 10 hours ago.
Jul 24, 2024 — Jul 24, 2025
Commit Message Contributor Files Modified Lines Added Lines Removed Code Location Date
Actually process inclusively, as the usage text says we do. More... about 7 years ago
Run ovStoreBuild as a separate process, not part of the executive process. More... about 7 years ago
Don't die, caExit() instead, when files can't be opened. More... about 7 years ago
Add a tiny bit of whitespace. More... about 7 years ago
Don't 'cat | dx upload', just read the file directly. More... about 7 years ago
Update comments. More... about 7 years ago
Add executiveMemory and executiveThreads, and allow grid jobs to run in the canu task if they fit. More... about 7 years ago
Remove unused option ovsMethod. More... about 7 years ago
Update app to check which region it is in and appropriately request resources to avoid mixing and crashing More... about 7 years ago
Add a target for dnanexus. More... about 7 years ago
Add back objectStore=TEST, but make it behave (mostly) like DNANEXUS. More... about 7 years ago
Make the 4-unitigger directory, if it doesn't exist, which it doesn't when in cloud mode. More... about 7 years ago
Remove early stop for objectStore=TEST. More... about 7 years ago
Only submitScript() if there is work to do. More... about 7 years ago
Remove excessively general sequenceFileExists(). More... about 7 years ago
Use simple fileExists() to check if contig sequence file exists. More... about 7 years ago
Don't check before fetchSeqStore() in main (the function does it); don't skip the fetch if the tar exists locally. More... about 7 years ago
Fix comment formatting. More... about 7 years ago
Check parameters for validity earlier (and fail earlier) so we can use them earlier. More... about 7 years ago
Redirect stderr to null, so I stop being annoyed by a warning from cp that ZFS doesn't support FreeBSD flags. More... about 7 years ago
Remove unused TEST objectStore environment. Stop logging object store events. More... about 7 years ago
Up-case objectStore value. Add a few checks on validity of object store parameters. More... about 7 years ago
Don't set objectStoreNameSpace; set in Grid_Cloud.pm. More... about 7 years ago
Remove a bit of excess white space. Then eat up any space savings with this ginormous log message. More... about 7 years ago
Add some vertical white space to clean up the emitted shell script. More... about 7 years ago
Add newline so we don't emit '> ...sizes.txtfi' to the shell script. Oops. More... about 7 years ago
Fix indenting in emitted shell code when uploading store data to object stores. More... about 7 years ago
Don't stash reads unless we just dumped them. Also stash empty files if correction/trimming has failed. More... about 7 years ago
Fix corrected/trimmed read stashing again More... about 7 years ago
Fix overlap store stash More... about 7 years ago