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Inactive
Commits
: Listings
Analyzed
3 days
ago. based on code collected
3 days
ago.
Aug 19, 2024 — Aug 19, 2025
Showing page 13 of 61
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Support for INT, FLOAT, and MULTI argument types in Tool plugins. Expunged all Swing dependencies from tracks package.
Eric Smith
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over 13 years ago
Removed unsightly black line from insertion diamond.
Eric Smith
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over 13 years ago
Plugin changes required for UCSC Chooser. Moved PluginRepositoryDialog in with the other dialogs.
Eric Smith
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over 13 years ago
Initial check-in of UCSC Chooser plugin.
Eric Smith
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over 13 years ago
Support for loading gap tracks (generic interval with no name field).
Eric Smith
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over 13 years ago
Changes to support UCSC Chooser plugin. When configuring mappings for an existing table, MappingDialog is now pre-configured appropriately.
Eric Smith
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over 13 years ago
Changes necessary to support UCSC Chooser plugin.
Eric Smith
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over 13 years ago
Check-in of XML tool plugin support.
Eric Smith
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over 13 years ago
Improved ColourAccumulator performance by accumulating Paths instead of Areas.
Eric Smith
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almost 14 years ago
GraphPane.showProgress() calls validate() to make progress panel appear in a timely fashion.
Eric Smith
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almost 14 years ago
Initial check-in of new XML-based tool plugins.
Eric Smith
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almost 14 years ago
Plugins updated for Savant 2.0 API.
Eric Smith
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almost 14 years ago
Plugins updated for Savant 2.0 API.
Eric Smith
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almost 14 years ago
Merged in cleaned-up DialogUtils from MedSavant.
Eric Smith
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almost 14 years ago
Cleaned up API for Savant 2.0.
Eric Smith
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almost 14 years ago
Cleaned up API for Savant 2.0.
Eric Smith
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almost 14 years ago
Fixed Tabix reader error when last column is the end-position.
Eric Smith
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almost 14 years ago
Was throwing exceptions due to some missing checks for MAX_RANGE_TO_SEARCH.
Eric Smith
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almost 14 years ago
Make selection range translucent so that cytoband shows through.
Eric Smith
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almost 14 years ago
Selected range is now drawn with clearer border and without a gradient, to make it look more closely associated with the ruler.
Eric Smith
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almost 14 years ago
Track-related classes moved out of savant.view.swing.*.
Eric Smith
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almost 14 years ago
Track-related classes moved out of savant.view.swing.*.
Eric Smith
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almost 14 years ago
Tabs (e.g. for plugins) now open only on a click. When open they are always pinned.
Eric Smith
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almost 14 years ago
If there is not enough room to draw the labels, some ticks are suppressed.
Eric Smith
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almost 14 years ago
Strand SNP mode now does better job of indicating the mouse position.
Eric Smith
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almost 14 years ago
Added ColourAccumulator class. SNP, Strand SNP, and sequence tracks are now all rendered using proper anti-aliasing.
Eric Smith
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almost 14 years ago
SNP and Strand SNP modes now indicate insertions and deletions. SNP Finder now lines up with SNP and Strand SNP modes.
Eric Smith
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almost 14 years ago
Added option for white background.
Eric Smith
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almost 14 years ago
Legends for BAM, BED, and sequence tracks.
Eric Smith
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almost 14 years ago
Export Image now provides .png extension by default.
Eric Smith
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almost 14 years ago
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