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Analyzed about 19 hours ago. based on code collected about 19 hours ago.

Commit Message	Contributor	Files Modified	Lines Added	Lines Removed	Code Location	Date
Jul 22, 2024 — Jul 22, 2025 Showing page 48 of 351 Search / Filter on:
Explicitly ignore length zero reads from seqStore.	Brian P. Walenz	More...				almost 7 years ago
Also report word-frequency.	Brian P. Walenz	More...				almost 7 years ago
Disable format truncation warnings for FreeBSD.	Brian P. Walenz	More...				almost 7 years ago
Add a method to kmerCountStatistics to return the 'word-frequency' of a kmer count value.	Brian P. Walenz	More...				almost 7 years ago
Add method to dropStatistics() from a kmerCountFileReader object.	Brian P. Walenz	More...				almost 7 years ago
More printf() formatting.	Brian P. Walenz	More...				almost 7 years ago
If on MacOS, return bytes, not millibytes, from getProcessSize().	Brian P. Walenz	More...				almost 7 years ago
Decrease default nanopore error rate, read quality has improved so this saves runtime	Sergey Koren	More...				almost 7 years ago
Properly fix truncated consensus bug, without introducing lots of indels as the previous fix did	Sergey Koren	More...				almost 7 years ago
Add reverse comp for gap (-) in case someone wants to RC an alignment string	Sergey Koren	More...				almost 7 years ago
Unify configuration of the two counting algorithms, so meryl can pick 'simple' or 'complex' based on expected size of each algorithm.	Brian P. Walenz	More...				almost 7 years ago
Explicitly use size_t for talking to snappy, but uint64 when saving to files, because MacOS insists they're different. Issue #1066.	Brian P. Walenz	More...				almost 7 years ago
Stop warning about format truncation on MacOS.	Brian P. Walenz	More...				almost 7 years ago
Implement another idea that doesn't work.	Brian P. Walenz	More...				almost 7 years ago
Explicitly loadStatistics(), so we can get the number of distinct kmers.	Brian P. Walenz	More...				almost 7 years ago
Don't try to change a count op into a pass-through op if we're only configuring.	Brian P. Walenz	More...				almost 7 years ago
Dump libraries.txt if it doesn't exist because seqStore was created by hand.	Brian P. Walenz	More...				almost 7 years ago
Big changes to allow multithreaded streaming operations.	Brian P. Walenz	More...				almost 7 years ago
Update tutorial.rst	Sergey Koren	More...				almost 7 years ago
Update tutorial.rst	Sergey Koren	More...				almost 7 years ago
Update faq.rst	Sergey Koren	More...				almost 7 years ago
Update faq.rst	Sergey Koren	More...				almost 7 years ago
Add conditional compilation to show file open and close events.	Brian P. Walenz	More...				almost 7 years ago
Let kmerCountFileIndex store the proper values for prefixes split across multiple blocks.	Brian P. Walenz	More...				almost 7 years ago
Fix bug when trying to load data from databases with multiple blocks for each prefix. Add a bunch of debugging.	Brian P. Walenz	More...				almost 7 years ago
In 'print', report if the kmer is canonical or a palindrome.	Brian P. Walenz	More...				almost 7 years ago
Initialize inputs before outputs.	Brian P. Walenz	More...				almost 7 years ago
Add some disabled debug to kmerCountFileWriter::addMer().	Brian P. Walenz	More...				almost 7 years ago
If no prefix size is supplied, set it to AT LEAST (not at most) 8.	Brian P. Walenz	More...				almost 7 years ago
Fix wordArray::allocate() so it doesn't reallocate blocks, but then insist the array must be empty first. Alos, sabe the ith block in the ith position, not the last position.	Brian P. Walenz	More...				almost 7 years ago

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