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Low Activity
Commits
: Listings
Analyzed
about 4 hours
ago. based on code collected
about 4 hours
ago.
Jul 24, 2024 — Jul 24, 2025
Showing page 49 of 351
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Code Location
Date
Add isCanonical() and isPalindrome(), move implementation of reverseComplement() to a helper function.
Brian P. Walenz
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almost 7 years ago
Switch from stdout to stderr for ifdef'd diagnostics in kmerCountFileReaderBlock::loadBlock().
Brian P. Walenz
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almost 7 years ago
Update faq.rst
Sergey Koren
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almost 7 years ago
Tiny bit of code cleanup, moving variable declarations closer to where they're used.
Brian P. Walenz
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almost 7 years ago
Skip empty sequences.
Brian P. Walenz
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almost 7 years ago
If configuring, allow counting with no output specified.
Brian P. Walenz
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almost 7 years ago
If only configuring, return from counting operations before doing anything with the output and etc.
Brian P. Walenz
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almost 7 years ago
Rearrange functions.
Brian P. Walenz
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almost 7 years ago
Fix breakage probably caused by changes to the kmer writer.
Brian P. Walenz
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almost 7 years ago
Change report of expected memory to use slightly.
Brian P. Walenz
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almost 7 years ago
Expand scaledNumber() and scaledUnit() to ridiculously large numbers; add scaledName().
Brian P. Walenz
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almost 7 years ago
Delete the sqReadData object when the sqStore input is closed.
Brian P. Walenz
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almost 7 years ago
Add option -C to only configure things (and report memory needed for counting). Fix opCount to better estimate memory usage.
Brian P. Walenz
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almost 7 years ago
Add a method to return the bytes of memory resident (not just allocated).
Brian P. Walenz
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almost 7 years ago
Logging. Report when merging starts, disable details of what is being merged.
Brian P. Walenz
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almost 7 years ago
Add getPageSize().
Brian P. Walenz
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almost 7 years ago
Move the pretty-print scaledNumber() and scaledUnit() functions from merylOp-count.C to strings.C.
Brian P. Walenz
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almost 7 years ago
Cast a void* to char* before before attempting to pass it to writeToFile().
Brian P. Walenz
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almost 7 years ago
Slightly cleanup to show that we always have a sqStore object.
Brian P. Walenz
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almost 7 years ago
Add comments (and an assert) about _scores never being NULL.
Brian P. Walenz
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almost 7 years ago
Add note about never using isContained.
Brian P. Walenz
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almost 7 years ago
Fail catastrophically if there are no overlaps.
Brian P. Walenz
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almost 7 years ago
Fail catastrophically if there are no overlaps.
Brian P. Walenz
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almost 7 years ago
Explicitly initialize Left_Delta_Len and Right_Delta_Len in the constructor.
Brian P. Walenz
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almost 7 years ago
printf formatting (again).
Brian P. Walenz
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almost 7 years ago
Add an assert to ensure coverage is within expected range.
Brian P. Walenz
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almost 7 years ago
Ensure the prefix and suffix is at least one bit wide.
Brian P. Walenz
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almost 7 years ago
Fix some dangerously mis-indented code.
Brian P. Walenz
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almost 7 years ago
Fully clear the _name member.
Brian P. Walenz
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almost 7 years ago
Remove unused '_inputFile' member.
Brian P. Walenz
More...
almost 7 years ago
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